Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA polymerase III, epsilon subunit from Dechlorosoma suillum PS

 Score =  224 bits (572), Expect = 9e-64
 Identities = 120/238 (50%), Positives = 158/238 (66%), Gaps = 13/238 (5%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R + LDTETTG+      H +GHRIIE+  VE++NR+LT RHFH Y+ P+R I   A  V
Sbjct: 2   RQIFLDTETTGLE-----HKQGHRIIEVAGVEMVNRRLTNRHFHKYINPERAIDEGAQAV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
           HGI+ EFL DKP++  +  +F+DFI+GAELV HNA FDVGF++ E A+L   +    + C
Sbjct: 57  HGISLEFLADKPKFAAIAADFLDFIRGAELVIHNAAFDVGFLNAELARL--KLPPVGEVC 114

Query: 131 K-VTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTS 189
             V DTL MAK + PGK+NNL+ LC+RY +DNSHRTLHGALLDAEILA+VY+ MT GQ S
Sbjct: 115 SGVVDTLKMAKEMHPGKKNNLNALCDRYEVDNSHRTLHGALLDAEILAEVYVAMTRGQES 174

Query: 190 LQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAK--SGTCLW 245
           L    +       +A  +  +  +R+  +VL AS +EL AH+  L  + K   G CLW
Sbjct: 175 LM---IDLGQAPAAAAEIAMSTGQRRPTRVLRASIEELAAHEQVLAGINKESKGKCLW 229