Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis JJ

 Score = 45.4 bits (106), Expect = 8e-10
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 13  VVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVHG 72
           V LDTETTG++       +  ++  +   E +N K   + F+ Y   D  +   A +VHG
Sbjct: 3   VFLDTETTGLHPG-----QIAQLSYLVTDEDLNLK---KVFNQYYSVDH-MSRSAAKVHG 53

Query: 73  ITDEFLKDKPE---YKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDF 129
           +T E L +      ++D  +E  + ++ + ++ HN  FD+ F+  EF +LG        F
Sbjct: 54  LTMEILDELSNGMTFEDTVDEVREDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKF 113

Query: 130 CKVTDTLAMAKRIFPGKR 147
           C +     + K   PG++
Sbjct: 114 CTMFHFTPICK--LPGQK 129