Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., exonuclease, RNase T and DNA polymerase III from Marinobacter adhaerens HP15

 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 27/182 (14%)

Query: 13  VVLDTETTGMNREGGPHYEGHRIIEIGAVEI-INRKLTGRHFHVYLKPDRDIQLEAIEVH 71
           V LD ETTG++         H I+ IG V   ++    G+  H  ++P   +   +I +H
Sbjct: 53  VALDFETTGLDANQ------HSIVSIGLVPFTLDGIQLGKARHWIVRPKLPLHQTSITIH 106

Query: 72  GITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCK 131
           GIT   +   P+  D+ ++    + G   V H    +  F D     L   +G+   F  
Sbjct: 107 GITHSDIDQAPDLNDILKDLFACLNGRIPVVHYRNIERSFFD---VALQWRLGEGIRF-P 162

Query: 132 VTDTLAMAKRIFP-----------GKRNNLDILCE---RYGIDNSHRTLHGALLDAEILA 177
           + DT+A+   + P           GK+     L +   RYG+   H   H AL+DA   A
Sbjct: 163 LIDTMAIEAHLHPDRNPSRWQQLLGKKPVSIRLADSRLRYGL--PHYAAHNALIDAVATA 220

Query: 178 DV 179
           ++
Sbjct: 221 EL 222