Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 19/176 (10%)

Query: 12  IVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVH 71
           +VVLD ET+G++       +G R IEIGAV I   ++T R F   + P   I     +  
Sbjct: 13  LVVLDFETSGLSPN-----QGARAIEIGAVLIEQGQITTR-FSELMNPGFRINAFIEDYT 66

Query: 72  GITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLG----GAIGKTS 127
           GI+++ L       +V   F +FI    LVAHNA FD  F+D EFA +G    G  G   
Sbjct: 67  GISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNAAFDQRFLDAEFAHIGHQYSGQFG--- 123

Query: 128 DFCKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLM 183
             C    +L +A+R++P   N+      R+    ++ T H AL DAE+   ++L M
Sbjct: 124 --C----SLLLARRLYPEAINHQLATLVRHKQLPNNGTFHRALADAEMTGHLWLRM 173