Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  275 bits (704), Expect = 5e-79
 Identities = 144/248 (58%), Positives = 179/248 (72%), Gaps = 9/248 (3%)

Query: 1   MNTSNNAEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPD 60
           MN  +NA  Q  V+LDTETTGMN+  G  Y GHRIIEIG VE+INR+LTGR+FH Y+ P 
Sbjct: 1   MNIISNASRQ--VILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYFHQYINPG 58

Query: 61  RDIQLEAIEVHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLG 120
           + I  EAI VHGITDE + ++P +  + +EF+DFI GAE+VAHNA FDV FMD+EF+ L 
Sbjct: 59  QAIDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQ 118

Query: 121 GAIGKTSDFCKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVY 180
               KTS+ C++ D+L +AK + PG++NNLD LC+RYGIDNS R  HGALLDAEILADVY
Sbjct: 119 PLGPKTSEICEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRLYHGALLDAEILADVY 178

Query: 181 LLMTGGQTSLQFSS--VTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVA 238
           L MTGGQT    S+  V Q +G      ++R       LKV++ASADEL  H+ RLD+VA
Sbjct: 179 LAMTGGQTKFNLSNDEVGQEAG-----GIQRFDPASLNLKVISASADELVMHEKRLDLVA 233

Query: 239 KSGTCLWR 246
           KSG CLWR
Sbjct: 234 KSGKCLWR 241