Pairwise Alignments

Query, 419 a.a., TIGR03503 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  154 bits (390), Expect = 4e-42
 Identities = 119/414 (28%), Positives = 203/414 (49%), Gaps = 22/414 (5%)

Query: 12  LISLSSLA--AQQSSMSLLDNRFRVDPTITQITFVIYREKDSQPVVLVRPDGSKYYQWRN 69
           L++L++ A     S  S L NRFR+D  + ++T  + R+  S PV++V PDGSK+Y  R+
Sbjct: 16  LLTLNATAQVVPSSQASELKNRFRIDHMVDELTLFVQRDYGSAPVIIVLPDGSKWYVSRH 75

Query: 70  PENVRWYQESSMDIISIENPMPGPWQAIGKVTPKNNIKLISNLQLTTDVFPSRVFQGEEF 129
           PE+V+W    S DII+I++PMPGPWQ +GKV   + I  +S L +  D  P  ++QGE  
Sbjct: 76  PESVQWVDGLSGDIITIKSPMPGPWQLLGKVAKGSKIDKVSKLGIEVDPMPQPLYQGERI 135

Query: 130 KFTARLTSDGKPLLLRDFLDRVNLKVTFT-KFVENEDSLAKEARPIPEVLGEFADDGTLL 188
           K TA+L  D +    R  +  ++  V +T KF+       +       ++G + D+G  L
Sbjct: 136 KVTAKLLGDEQ----RMRMPGLDYLVDWTAKFISEHRPGDENFAAGTLIVGSYKDNGEGL 191

Query: 189 DEKPGDGVFTVALKMAIEPGKYRVRITSGNGVFLRAQEQEVLVYPTPISTTFI--QSRLT 246
           D  P DG+FT  + +    G YR  +++ N  F R    ++++ P P+S + I  +  L 
Sbjct: 192 DGAPDDGIFTADINLNQPWGHYRFLVSAKNNTFSREVGGDIVLLPMPVSLSVIAPEDHLK 251

Query: 247 GA-PHQVLFTGEQGMIEPGSLVAHIRHRHPYQDDYIAQAQSGKESLTAKLTIPYDGQFGN 305
           G    +V+   EQ  +        +      Q     Q+ + K     +LT+P   +FG+
Sbjct: 252 GRWQVEVIVDDEQLQLANTHFEFELVGPAGLQLTLPVQSVTDKR---MQLTLPQVSEFGS 308

Query: 306 YSWDGKVWATELASQRELYFPIGDQTYSVVDELNIAEVRRIQEEEEALRLKQEQELLIIQ 365
           Y   G   AT + S RE+   + ++ +++V      E     EE  A+  K   +  I +
Sbjct: 309 YRIKGIAAATSV-SGREVLLTLPEKFFNLVPP---PEPPPTAEELAAIAAK---KAAIAE 361

Query: 366 MREEQRSRNMMYIIVGNIVVLILALAVWFVLRKIKMKKAAVPEMQLNMPPKKGK 419
            + +  +  M +I+  N+ +L+L      V RK +  K A+      +  ++ K
Sbjct: 362 AKAKDDA--MFWIVTVNLSLLVLGTLALLVWRKRQNLKQALAVTAARLEEERAK 413