Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (250), Expect = 1e-25
 Identities = 95/358 (26%), Positives = 164/358 (45%), Gaps = 24/358 (6%)

Query: 153 PPEVWTFLKEKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGE 212
           P E    + E  FF M++ +Q+GG +    A ++ L+++    G  S+ + V NS+G   
Sbjct: 36  PREAIDEMAELGFFGMLVPEQWGGCDTGYLAYAMTLEEIAAGDGACSTIMSVHNSVGCVP 95

Query: 213 LLQHYGTEEQKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGM 272
           +L+ +G +EQK  +L  LA G  +  FALT P+AGSDA S+       + + EG   +  
Sbjct: 96  ILK-FGNDEQKAKFLTPLASGAMLGAFALTEPQAGSDASSLK-----TRARLEGDHYV-- 147

Query: 273 RLTWNKRYITLAPVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPL 332
            L   K++IT    A V+ + F + DP        + GI+  ++PT   G  +      L
Sbjct: 148 -LNGCKQFITSGQNAGVV-IVFAVTDPSA-----GKRGISAFIVPTDSPGYSVARVEDKL 200

Query: 333 NVPFQNGPTRAKDLFVPLDFIIGGP-KMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAA 391
               Q+     + LF  L   +G      G+G+++ +  L  GR + + + + G  + A 
Sbjct: 201 G---QHASDTCQILFEDLKVPVGNRLGEEGEGYKIALANLEGGR-VGIAAQAVGMARAAF 256

Query: 392 LATGAYARIRRQFKQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAI 451
            A   YAR R  F +PI + + +   LA +A    V     +   A  D G+   V +++
Sbjct: 257 EAARDYARERSSFGKPIIEHQAVAFRLADMATQIAVARQMVHYAAALRDSGQPALVEASM 316

Query: 452 VKYHCTHRGQRSIIDAMDIVGGKGICLGPANF-LARGYQGAPIAVTVEGANILTRSMI 508
            K   +   ++    A+  +GG G      +F L R Y+   +    EG + + R +I
Sbjct: 317 AKLFASEMAEKVCSMALQTLGGYGYL---NDFPLERIYRDVRVCQIYEGTSDIQRMVI 371