Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score =  100 bits (249), Expect = 1e-25
 Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 24/346 (6%)

Query: 165 FFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKN 224
           FF M++ +Q+GG +    A ++ L+++    G  S+ + V NS+G   +L+ +G E+QK+
Sbjct: 48  FFGMLVPEQWGGSDTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPILR-FGNEQQKS 106

Query: 225 YYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLA 284
            +L  LA G++I  FALT P+AGSDA S+       + + +G   +   L   K++IT  
Sbjct: 107 DFLTPLARGEQIGAFALTEPQAGSDASSLR-----TRARRDGDHYV---LNGAKQFITSG 158

Query: 285 PVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRA- 343
             A  + + F + DP+   G     GI+  ++PT   G ++      L     +    A 
Sbjct: 159 KHAGTV-IVFAVTDPDAGKG-----GISAFIVPTDSPGYQVVRVEDKLGQHASDTCQIAF 212

Query: 344 KDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQ 403
           +DL VP+   +G     G+G+R+ +  L  GR I + + + G  + A  A   YAR R  
Sbjct: 213 EDLRVPVANRLG---EEGEGYRIALANLEGGR-IGIAAQAVGMARAAFEAARDYARDRET 268

Query: 404 FKQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRS 463
           F +PI + + +   LA +A    V     +   A  ++G    V +++ K   +   ++ 
Sbjct: 269 FGKPIIEHQAVAFRLADMATQIAVARQMVHHAAALREVGRPALVEASMAKLFASEMAEKV 328

Query: 464 IIDAMDIVGGKGICLGPANF-LARGYQGAPIAVTVEGANILTRSMI 508
              A+  +GG G     A+F + R Y+   +    EG + + R +I
Sbjct: 329 CSAAIQTLGGYGYL---ADFPVERIYRDVRVCQIYEGTSDIQRLVI 371