Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 6e-24
 Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 32/353 (9%)

Query: 162 EKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEE 221
           E     M++ +++GG      A +L +++++   G   + + + NS+G G +L +YG++ 
Sbjct: 48  ELGLLGMVVPEEWGGSYIDYVAYALAVEEISAGDGATGALMSIHNSVGCGPVL-NYGSQA 106

Query: 222 QKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYI 281
           QK+ +L  LA G+ I CFALT P+AGS+A ++     +  G W         L  +K++ 
Sbjct: 107 QKDEWLTELASGRAIGCFALTEPQAGSEAHNLRTRAELVDGHWV--------LNGSKQFC 158

Query: 282 TLAPVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNG-P 340
           + A   + L + F + DPE  LG K   G++  L+PT   G  +      + +   +   
Sbjct: 159 SNAK-RSKLAIVFAVTDPE--LGKK---GLSAFLVPTDTPGFAVERSEHKMGIRASDTCG 212

Query: 341 TRAKDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARI 400
               D  +P   ++G     G+G  + +  L  GR I + + + G  + A  A   YAR 
Sbjct: 213 VSLSDCRIPEANLLG---ERGKGLAIALSNLEGGR-IGIGAQALGIARAAFEAALLYARE 268

Query: 401 RRQFKQPIGQMEGIEEPLARL-----AGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYH 455
           R QF +PI + + I   LA +     A    ++ AA  L  AG+    + S      K  
Sbjct: 269 RVQFGKPIAEHQSIANMLADMQTQLNAARLLILHAA-RLKSAGLPCLSEASQ----AKLF 323

Query: 456 CTHRGQRSIIDAMDIVGGKGICLGPANFLARGYQGAPIAVTVEGANILTRSMI 508
            +   ++    A+ I GG G        + R Y+ A I    EG++ + R +I
Sbjct: 324 ASEMAEKVCSQAVQIHGGYGYLEDYP--VERYYRDARITQIYEGSSEIQRLLI 374