Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  766 bits (1977), Expect = 0.0
 Identities = 397/755 (52%), Positives = 520/755 (68%), Gaps = 12/755 (1%)

Query: 51  LYLAAVVVL-CLPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPD 109
           L +AAV+VL  +  +R   I+    A FK+VLP +S TE+EA+EAG VWWE ELF+GKP+
Sbjct: 7   LIIAAVIVLFAVKDLRMKFITQPVFAFFKRVLPPLSDTEREAMEAGDVWWEGELFRGKPN 66

Query: 110 WKKLHNIQAPKLSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMI 169
           W+ LH    P LSAEE+ FLD  V    +M+ D+ + H   DLPPE+W + K++ FFA+I
Sbjct: 67  WEALHAYGKPTLSAEEKEFLDNQVMTALSMIDDFDIVHNRKDLPPELWDYFKKEGFFALI 126

Query: 170 IKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPR 229
           I K+YGG  FSAYA S ++ KL   S   + TV VPNSLGPGELL HYGT+EQK+++LP 
Sbjct: 127 IPKKYGGKGFSAYANSTIVAKLASRSVSAAVTVMVPNSLGPGELLTHYGTKEQKDFWLPS 186

Query: 230 LAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATV 289
           LA+G+EIPCFALT PEAGSDAG+IPD GVV  G++ G EVLG+ LTWNKRYITLAPVATV
Sbjct: 187 LAKGEEIPCFALTGPEAGSDAGAIPDVGVVKNGEFNGNEVLGVELTWNKRYITLAPVATV 246

Query: 290 LGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVP 349
           LGLAF+++DP+GLLGDK+ +GITCALIPT   GVEIGNRH PLN+ F NG TR   +F+P
Sbjct: 247 LGLAFQMKDPDGLLGDKKHIGITCALIPTSHPGVEIGNRHNPLNMAFMNGTTRGDKVFIP 306

Query: 350 LDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIG 409
           LD+IIGGP+ AG+GWRMLVECLS GRGI+LP+ +T         T AY+ +R+QF   IG
Sbjct: 307 LDWIIGGPQYAGKGWRMLVECLSAGRGISLPALATASGHVTTKTTTAYSYVRKQFGMSIG 366

Query: 410 QMEGIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMD 469
             EG++E LAR+ GN Y ++AA  LT  GIDL  KPSV++AI KYH T  G+  + DAMD
Sbjct: 367 HFEGVQEALARIIGNTYQLEAARRLTTTGIDLKVKPSVVTAIAKYHMTEMGRAVMDDAMD 426

Query: 470 IVGGKGICLGPANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREMEAAY 529
           I  GKGI LGP N+L   Y   PI++TVEGANILTRS++IFGQGA RCHPYVL EMEAA 
Sbjct: 427 IQSGKGIQLGPKNYLGHAYMANPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEAAG 486

Query: 530 SPNSD-AVEKFDSALAGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSA 588
             + D A+E+FD  L GH+G+   N + SL+  LT    +Q+P    TKRYYQ + R SA
Sbjct: 487 MEDIDAALERFDDLLLGHMGYATRNALSSLFSALTASRFAQSPVSGDTKRYYQHMGRMSA 546

Query: 589 NLALLADISMAVLGGSLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWG 648
            LA++ D++M +LGG LKRRE LSARLGD+LS+LYL+SATLK FE++GR  +DLP VH+ 
Sbjct: 547 ALAIMTDMAMLILGGELKRREMLSARLGDVLSELYLASATLKLFEDNGRQHDDLPTVHYV 606

Query: 649 LQDSLRQTEIAIDEFLANFPNRIIGRALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSET 708
           +Q  L +   A+++ L NFP R +G  LR L+ P G   K PSDKL +++ + +  P   
Sbjct: 607 MQTRLMKAAKALEDALRNFPLRPVGWLLRALVFPLGNHFKGPSDKLATQVVEAMLKPGPA 666

Query: 709 RSRIGRHQYLTPS---DNNPAGKIEQALNVILQAEPLFEKACKALGQRRPFMGLDEVAKL 765
           R R+    +L PS   D     ++E+A     +   +++K   A  + +   G    A L
Sbjct: 667 RERL---TFLCPSFDGDKGGIAEVEEAFLAQYECRSIYKKLRSAQKEGK-LKGKGVSAAL 722

Query: 766 ---GLEAKVLTIQEAALLSEAEAHRLYTINVDDFA 797
               +E  V++ +E   + +A+  RL  +NVD+F+
Sbjct: 723 LSQAVEQGVISQEEHDKVLKADELRLAAVNVDEFS 757