Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  604 bits (1558), Expect = e-177
 Identities = 325/725 (44%), Positives = 455/725 (62%), Gaps = 8/725 (1%)

Query: 77  FKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKKLHNIQAPKLSAEEQAFLDGPVNEV 136
           FKKVLP++S TE+EAL+AG VW E  +++G PD+  L  +    LS EEQAFLDGPV  +
Sbjct: 7   FKKVLPSISTTEQEALDAGDVWLEGSIYQGIPDFDALRQVPGATLSDEEQAFLDGPVQTL 66

Query: 137 CAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSG 196
             MV D+ + + L  LP  +  FLKE KFF++II K +GGLEFS YA S ++  +   S 
Sbjct: 67  IEMVDDFAIQNSL-HLPDNILNFLKEHKFFSLIIPKAFGGLEFSPYANSTIVATIAAKSS 125

Query: 197 VLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDF 256
            ++ TV VPNSLGPGELL HYGT+ Q++++LPRLA G+EIPCFALTSPEAGSDAG IPD 
Sbjct: 126 AVAVTVMVPNSLGPGELLMHYGTQAQQDFWLPRLANGQEIPCFALTSPEAGSDAGGIPDI 185

Query: 257 GVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGLAFKLRDPEGLLGDKEELGITCALI 316
           G V  G+++G++VLG+ +TW+KRYITLAP+ATVLGLAFK+ DP+GLLG KE+LGITCALI
Sbjct: 186 GTVTMGEYQGEQVLGLSVTWDKRYITLAPIATVLGLAFKVEDPQGLLGGKEQLGITCALI 245

Query: 317 PTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRG 376
           P    GVE+GNRH P+   F NG TR +++F+P+DFIIGG +  G+GW+MLV CL  GRG
Sbjct: 246 PKSHPGVELGNRHDPMGCRFYNGTTRGENVFIPMDFIIGGQQNIGRGWQMLVACLGAGRG 305

Query: 377 ITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQMEGIEEPLARLAGNAYVMDAASNLTV 436
           I+LP+      + +  ++  YA +R QF   IG+ EGI+E LA +AG  Y+ +A   LT 
Sbjct: 306 ISLPALGVSVSQASFKSSAEYAAVREQFGLAIGKFEGIQEKLADIAGKTYLQEAMRVLTT 365

Query: 437 AGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVGGKGICLGPANFLARGYQGAPIAVT 496
            G+ LG KPSV++A+ KYH T  G+  +  AMDI  GK I  GP N LA GY   PIA+T
Sbjct: 366 EGLGLGLKPSVVTAMAKYHMTEIGRDVLNSAMDIQAGKAIQRGPQNTLASGYVAQPIAIT 425

Query: 497 VEGANILTRSMIIFGQGAIRCHPYVLREMEAAYSPNSDAVEKFDSALAGHVGFVLSNLVR 556
           VEGANILTR+++IFGQG +RCHP++   +EA +S + DA + F+      VG+ + N +R
Sbjct: 426 VEGANILTRNLMIFGQGVMRCHPHLQSMVEAIHSDDKDADKTFNRIFKQTVGYSVGNSLR 485

Query: 557 SLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLALLADISMAVLGGSLKRRERLSARLG 616
           +  LGL                Y + +++ ++ LA+ AD S+ VLGG LK+ E LSARLG
Sbjct: 486 AFRLGLLPFTADAKSELSEVVEYEKAVHKLASKLAVYADFSLLVLGGKLKQAEMLSARLG 545

Query: 617 DILSQLYLSSATLKRFE---NDGRPAEDLPLVHWGLQDSLRQTEIAIDEFLANFPNRIIG 673
           D++S LY + A+++ +E   +    A+  P   +  + +L   E A+  FL NFP+    
Sbjct: 546 DVMSYLYAAMASIRYYEQKVSSEHRAQAKPYFEYATRWALVNAENALLSFLDNFPSAATR 605

Query: 674 RALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSETRSRIGRHQYLTPSDNNPAGKIEQAL 733
           + ++++ + +    K  +D L  +LA   Q  ++ + ++       P D N     +QA 
Sbjct: 606 QLMKLITVTYSPKMKKINDDLIRELAHEAQLNTQIKRQLTHLVKPVPGDGNDIN--QQAY 663

Query: 734 NVILQAEPLFEKACKAL--GQRRPFMGLDEVAKLGLEAKVLTIQEAALLSEAEAHRLYTI 791
              +   PL  K  K L  G  +  +   +      EAK++T  E   L +    R   I
Sbjct: 664 LAKIACLPLLAKVKKGLKQGYFKSGVRFAQTLDRAREAKIITEGEHKQLLDYNLKRERAI 723

Query: 792 NVDDF 796
            VD+F
Sbjct: 724 RVDEF 728