Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., acyl-CoA dehydrogenase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 32/330 (9%)

Query: 153 PPEVWTFLKEKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGE 212
           P E+W  L E     + + ++YGG +    A  + +++++  S  +  + G  ++L   +
Sbjct: 45  PNELWPVLGEMGLLGVTVPEEYGGADMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQ 104

Query: 213 LLQHYGTEEQKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGM 272
           + ++ G  EQK  YLP+L  G+ I   A++ P AGSD  S+         + EG   +  
Sbjct: 105 INRN-GNAEQKAKYLPKLVSGEHIGALAMSEPNAGSDVVSMK-----LSARKEGDRYI-- 156

Query: 273 RLTWNKRYITLAPVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPL 332
            L  NK +IT  P A    +  K         DK   GIT  ++    KG     +   L
Sbjct: 157 -LNGNKMWITNGPDADTYVIYAKTD------MDKGPHGITAFIVERGFKGFSQAQKLDKL 209

Query: 333 NVPFQNGPTRA-KDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAA 391
            +   N      +D  VP + I+GG      G ++L+  L   R +   S    GI TA 
Sbjct: 210 GMRGSNTCELVFEDCEVPEENILGG---LNNGVKVLMSGLDYERVVL--SGGPLGIMTAC 264

Query: 392 L-ATGAYARIRRQFKQPIGQMEGIEEPLARL-----AGNAYVMDAASNLTVAGIDLGEKP 445
           +     Y   R QF + IGQ + ++  LA +     A  +YV + A +      D GE  
Sbjct: 265 MDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYVYNVAKS-----CDRGETT 319

Query: 446 SVISAIVKYHCTHRGQRSIIDAMDIVGGKG 475
              +A    +      +  +DA+ ++GG G
Sbjct: 320 RKDAAGAILYSAELATKMALDAIQLLGGNG 349