Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 527/805 (65%), Positives = 637/805 (79%), Gaps = 2/805 (0%)

Query: 1   MEILLSTLIMLLILGACLYQRTSLFTSLAALTFTMLALSLFGPVGFFGWALYLAAVVVLC 60
           M  LL   +ML  LGA  Y R SL TS       M   +    +    W ++LA  + L 
Sbjct: 1   MTSLLWIFVMLFALGALAYLRVSLLTSTIIAAIVMALGTATASISPLAWLVFLAITLPLN 60

Query: 61  LPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKKLHNIQAPK 120
           + + R+S+I+   L ++K ++P MS TEKEA+EAGT WWEA+LF GKP+WKKLHN    +
Sbjct: 61  IGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVAR 120

Query: 121 LSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKKQYGGLEFS 180
           L+AEEQAF++GPV EVC M++ +QV+H+L DLP  +W +LK+  FFAMIIKK+YGGLEFS
Sbjct: 121 LTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEFS 180

Query: 181 AYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAEGKEIPCFA 240
           AYAQS VLQKL GVS  L+STVGVPNSLGPGELLQHYGT  Q+++YLPRLA+G E+PCFA
Sbjct: 181 AYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCFA 240

Query: 241 LTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGLAFKLRDPE 300
           LTSPEAGSDAG+IPDFG+VCKGQW+G+EVLGM+LTWNKRYITLAPVATVLGLAFKL+DP+
Sbjct: 241 LTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDPD 300

Query: 301 GLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDFIIGGPKMA 360
            LLGDKEELGITCALIPT + GVE G RHFPLN  FQNGPTR  ++FVPLDFIIGGP+MA
Sbjct: 301 KLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEMA 360

Query: 361 GQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQMEGIEEPLAR 420
           GQGWRMLVECLSVGRGITLPSNS GGIKTAA+ATGAYARIRRQFK PIG++EGIEEP+AR
Sbjct: 361 GQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMAR 420

Query: 421 LAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVGGKGICLGP 480
           + GNAY+MDA + LT  GIDLGEKPSVISAIVKYH T R Q+ +IDAMDI GGKG+CLG 
Sbjct: 421 IGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGE 480

Query: 481 ANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREMEAAYSPN-SDAVEKF 539
            N+L RGYQ APIA+TVEGANILTRSMII+GQGAIRCHPYVL EMEAA+ P+   ++  F
Sbjct: 481 NNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLNDF 540

Query: 540 DSALAGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLALLADISMA 599
           DSAL GH+GF  SNLVRS WLGLT  Y S +P +D TKRYYQ +NR+SANLALL+D++MA
Sbjct: 541 DSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAMA 600

Query: 600 VLGGSLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWGLQDSLRQTEIA 659
            LGG LKR+ER+SARLGD+LSQLYL+SATLKR++++GR +EDL LV W ++D+L + + +
Sbjct: 601 TLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQDS 660

Query: 660 IDEFLANFPNRIIGRALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSETRSRIGRHQYLT 719
           +D+ L NFP   +GR LRV++ PFGR  K PSD LD K+A+I+QTP  +R R+G+ Q+ T
Sbjct: 661 LDDLLNNFPMG-LGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCASRDRLGKGQFWT 719

Query: 720 PSDNNPAGKIEQALNVILQAEPLFEKACKALGQRRPFMGLDEVAKLGLEAKVLTIQEAAL 779
           PS  N  G  EQ    IL  EPL +K CKA G+R PFM LD++A  G    +L+ +E AL
Sbjct: 720 PSPFNAVGIQEQTFKDILACEPLHDKICKATGKRHPFMWLDKLAAEGKALGILSDEEVAL 779

Query: 780 LSEAEAHRLYTINVDDFAPQELAAK 804
           L  AE  R+ +INVDDF P EL A+
Sbjct: 780 LERAEIGRMKSINVDDFDPAELRAQ 804