Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  768 bits (1983), Expect = 0.0
 Identities = 391/750 (52%), Positives = 513/750 (68%), Gaps = 9/750 (1%)

Query: 53  LAAVVVLCLPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKK 112
           L  +V+  + ++R   I+    A FKKVLP +S TEKEA+EAG VWWEAELF+GKP+W  
Sbjct: 9   LVIIVLFGVKNIRMQCITRPVFAFFKKVLPPLSDTEKEAMEAGDVWWEAELFRGKPNWDT 68

Query: 113 LHNIQAPKLSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKK 172
           LH+   P+L+ EE+AF+D  V     M+ D+ +  E  DLPPE+W + K++ FFA+II K
Sbjct: 69  LHSYGRPRLTEEEKAFIDEQVMTALTMIDDFNIVQERKDLPPELWDYFKKEGFFALIIPK 128

Query: 173 QYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAE 232
           +YGG  FSAYA S ++ KL   S   + +V VPNSLGPGELL HYGT+EQ++++LP+LA 
Sbjct: 129 EYGGKAFSAYANSTIVSKLASRSVSAAVSVMVPNSLGPGELLTHYGTKEQRDHWLPKLAS 188

Query: 233 GKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGL 292
           G+ +PCFALT PEAGSDAG+IPD G+VC+G+++G+EVLG++L W+KRYITLAPV+TVLGL
Sbjct: 189 GEAVPCFALTGPEAGSDAGAIPDTGIVCRGEFQGEEVLGLKLNWDKRYITLAPVSTVLGL 248

Query: 293 AFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDF 352
           AF++RDPEGLLGDKEE+GITCALIPT   GVEIGNRH PLN+ F NG TR +D+F+PLD+
Sbjct: 249 AFQMRDPEGLLGDKEEIGITCALIPTDHPGVEIGNRHNPLNMGFMNGTTRGEDVFIPLDW 308

Query: 353 IIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQME 412
           IIGGP+ AG+GWRMLVECLS GRGI+LP+ +T         T AY+ +R QF   +GQ E
Sbjct: 309 IIGGPQYAGRGWRMLVECLSAGRGISLPALATASGHVTTKTTTAYSYVRHQFGLSLGQFE 368

Query: 413 GIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVG 472
           G++E LAR+  N Y ++AA  LT  GIDL  KPSV++AI KYH T  G+  + DAMDI  
Sbjct: 369 GVQEALARIIANTYQLEAARRLTTTGIDLKVKPSVVTAIAKYHMTEMGRDVLNDAMDIQS 428

Query: 473 GKGICLGPANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREME-AAYSP 531
           GKGI LGP N+L  GY   PI++TVEGANILTRS++IFGQGA RCHPYVL EME AA   
Sbjct: 429 GKGIQLGPKNYLGHGYMATPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEAAAMED 488

Query: 532 NSDAVEKFDSALAGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLA 591
             +A+E+FD+ L GH+G+   N + SLW  LT    + AP    TK+YY+ + R SA LA
Sbjct: 489 TGEALERFDNLLLGHMGYAARNALSSLWGALTGSRFNSAPVSGETKQYYKDMTRLSAALA 548

Query: 592 LLADISMAVLGGSLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWGLQD 651
            + D+SM V+GG LKR+E LSARLGD+LS+LYL SATLK FE++GR  +DLP VH+ +Q 
Sbjct: 549 FVTDLSMLVMGGDLKRKEMLSARLGDVLSELYLGSATLKLFEDNGRQQDDLPTVHYVMQL 608

Query: 652 SLRQTEIAIDEFLANFPNRIIGRALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSETRSR 711
            L++   A+   L NFPNR +  A+R L+ P G     P DKL   + Q +  P   R R
Sbjct: 609 RLQRAAKALYGALRNFPNRPLAYAMRALVFPLGNHFNGPDDKLTIAVCQSMLRPGPARDR 668

Query: 712 IGRHQYLTP---SDNNPAGKIEQALNVILQAEPLFE--KACKALGQRRPFMGLDEVAKLG 766
           +    +L P    DN    ++E A     +A+ LF+  +  +  G+       D +    
Sbjct: 669 L---THLCPDFEGDNGGIAEVEDAFIAQYKAKHLFKTLRNAQKEGKLERKQANDALYAQA 725

Query: 767 LEAKVLTIQEAALLSEAEAHRLYTINVDDF 796
            E K++T  E   L EA+  R   I VD+F
Sbjct: 726 YELKIITEAEHDTLLEADRLRKIAIAVDEF 755