Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 539/802 (67%), Positives = 640/802 (79%), Gaps = 2/802 (0%)

Query: 1   MEILLSTLIMLLILGACLYQRTSLFTSLAALTFTMLALSLFGPVGFFGWALYLAAVVVLC 60
           M  LL  + M+L+LGA  Y R SL T+  A    M A      VG   W ++L   + L 
Sbjct: 1   MTTLLWLIAMILVLGALAYLRVSLLTATIAPAVVMTAGWTLDVVGPISWIIFLVIALPLN 60

Query: 61  LPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKKLHNIQAPK 120
           + + RQ++IS   + V++ ++P MS TEKEA+EAGT WWEA+LF G P+WKKLHN    +
Sbjct: 61  ISAFRQNVISRPLMKVYRGIMPEMSSTEKEAIEAGTTWWEADLFAGNPNWKKLHNYPVAR 120

Query: 121 LSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKKQYGGLEFS 180
           LSA+EQAFLDGPV EVC MV+ +QV+H+LADLP EVW +LK+  FFAMIIKK+YGGLE+S
Sbjct: 121 LSADEQAFLDGPVEEVCRMVNQHQVSHQLADLPAEVWQYLKDHGFFAMIIKKKYGGLEYS 180

Query: 181 AYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAEGKEIPCFA 240
           AYAQS VLQKL G+S  L+STVGVPNSLGPGELLQHYGT EQ+NYYLPRLA+G E+PCFA
Sbjct: 181 AYAQSRVLQKLAGLSSELASTVGVPNSLGPGELLQHYGTPEQQNYYLPRLAKGLEVPCFA 240

Query: 241 LTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGLAFKLRDPE 300
           LTSPEAGSDAGSIPDFG+VCKGQWEG+EVLGM+LTWNKRYITLAPVATVLGLAFKLRDP+
Sbjct: 241 LTSPEAGSDAGSIPDFGIVCKGQWEGEEVLGMKLTWNKRYITLAPVATVLGLAFKLRDPD 300

Query: 301 GLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDFIIGGPKMA 360
            LLGDKEELGITCALIPT ++GVE G RHFPLN  FQNGPTR KD+FVPL FIIGGPKMA
Sbjct: 301 HLLGDKEELGITCALIPTDVEGVETGRRHFPLNCMFQNGPTRGKDVFVPLSFIIGGPKMA 360

Query: 361 GQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQMEGIEEPLAR 420
           GQGWRMLVECLSVGRGITLPSNS GG+KTAALATGAYARIRRQFK PIG++EGIEEP+AR
Sbjct: 361 GQGWRMLVECLSVGRGITLPSNSAGGVKTAALATGAYARIRRQFKLPIGKLEGIEEPMAR 420

Query: 421 LAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVGGKGICLGP 480
           + GNAY+MDA ++LT  GIDLGEKPSVISAIVKYH T R Q+ +IDAMDI GGKG+CLGP
Sbjct: 421 IGGNAYLMDAVTSLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGP 480

Query: 481 ANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREMEAAYSPNS-DAVEKF 539
            N+L RGYQ APIA+TVEGANILTRSMII+GQGAIRCHPYVL EME+A+   S   +  F
Sbjct: 481 NNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLPEMESAFDTQSGQGLANF 540

Query: 540 DSALAGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLALLADISMA 599
           D+A+ GH+GF  SN VRS WLGLT    S AP  D TKRYYQ +NR+SANLALL+D++MA
Sbjct: 541 DAAIFGHIGFATSNFVRSFWLGLTSSRFSNAPYSDKTKRYYQHMNRFSANLALLSDLAMA 600

Query: 600 VLGGSLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWGLQDSLRQTEIA 659
            LGG+LKR+ER+SARLGD+LSQLYL+SATLKR++++GR  +DLPLV W ++D+L + + +
Sbjct: 601 TLGGNLKRKERISARLGDLLSQLYLASATLKRYQDEGRQTDDLPLVQWAVEDALYKLQAS 660

Query: 660 IDEFLANFPNRIIGRALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSETRSRIGRHQYLT 719
           +D+ L NFP   +G  LR +M PFGR  K PSD LD K+A+I+QTP E+R R+G+ Q+ T
Sbjct: 661 LDDLLDNFPMG-LGGVLRTIMFPFGRPLKRPSDVLDHKVAKIMQTPCESRDRLGKGQFWT 719

Query: 720 PSDNNPAGKIEQALNVILQAEPLFEKACKALGQRRPFMGLDEVAKLGLEAKVLTIQEAAL 779
            S++N  G  EQ L  IL AEPLF+K CKA G+R PFM LD+VA  G    VL+  E  L
Sbjct: 720 NSEHNAVGIQEQTLKDILAAEPLFDKVCKASGKRLPFMWLDKVAAEGKALGVLSDSEVQL 779

Query: 780 LSEAEAHRLYTINVDDFAPQEL 801
           L  AE  R+ +INVDDF P EL
Sbjct: 780 LERAEIGRMKSINVDDFDPAEL 801