Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., acyl-CoA dehydrogenase (1.3.8.-) (from data) from Shewanella oneidensis MR-1

 Score =  747 bits (1929), Expect = 0.0
 Identities = 388/753 (51%), Positives = 505/753 (67%), Gaps = 15/753 (1%)

Query: 53  LAAVVVLCLPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKK 112
           +A + +  + S+R   I+      FKKVLP +S TE+EA+EAG VWWE ELF+G P+W  
Sbjct: 10  IAIIALFAVKSLRMQFITQPVFHFFKKVLPPLSDTEREAMEAGDVWWEGELFRGNPNWNT 69

Query: 113 LHNIQAPKLSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKK 172
           LH+   P L+AEE+ F+D  V     M+ D+ + H   DLPPE+W + K++ FFA+II K
Sbjct: 70  LHSYGKPTLTAEEKDFIDNQVMTALTMIDDFDIVHNRKDLPPELWDYFKKEGFFALIIPK 129

Query: 173 QYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAE 232
           ++GG  FSAYA S ++ KL   S   + TV VPNSLGPGELL HYGTEEQK  +LP LA+
Sbjct: 130 KFGGKAFSAYANSTIVSKLASRSVSAAVTVMVPNSLGPGELLTHYGTEEQKERWLPALAK 189

Query: 233 GKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGL 292
           G EIPCFALT PEAGSDAG+IPD G+VC+G++ G+EVLG++LTWNKRYITLAPVATVLGL
Sbjct: 190 GDEIPCFALTGPEAGSDAGAIPDVGIVCRGEFNGEEVLGLKLTWNKRYITLAPVATVLGL 249

Query: 293 AFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDF 352
           AF++RDP+GLLG+K+ LGITCALIPT   GV IG RH PLN+ F NG T+  ++F+PLD+
Sbjct: 250 AFQMRDPDGLLGEKKNLGITCALIPTDHPGVVIGRRHNPLNMAFMNGTTQGDEVFIPLDW 309

Query: 353 IIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQME 412
           IIGGP+ AG+GWRMLVECLS GRGI+LP+ +T     A   T AY+ +R QF   IGQ E
Sbjct: 310 IIGGPEFAGRGWRMLVECLSAGRGISLPALATASGHMATKTTTAYSYVRHQFGMAIGQFE 369

Query: 413 GIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVG 472
           G++E LAR+  N Y ++AA  LT  GIDL  KPSV++AI K+H T  G+  + DAMDI  
Sbjct: 370 GVQEALARIIANTYQLEAARRLTTTGIDLKVKPSVVTAIAKFHMTELGRAVMNDAMDIQS 429

Query: 473 GKGICLGPANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREMEAAYSPN 532
           GKGI LGP N+L   Y   PI++TVEGANILTRS++IFGQGA RCHPYVL EMEAA   N
Sbjct: 430 GKGIQLGPKNYLGHPYMSNPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEAAAMEN 489

Query: 533 S-DAVEKFDSALAGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLA 591
             DA+ +FDS L GH+G+   N   +L+  LT      AP    TK+YY+ ++R S+ LA
Sbjct: 490 QHDALTRFDSLLMGHMGYATRNAFSALFNALTASRFGNAPVSGETKQYYKDMSRLSSALA 549

Query: 592 LLADISMAVLGGSLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWGLQD 651
            + DISM ++GG LKR+E LSAR+GD+LSQLYL SATLK FE++GR  +DLP V + + +
Sbjct: 550 FMTDISMLIMGGDLKRKEMLSARMGDVLSQLYLGSATLKLFEDNGRQQDDLPAVRYVMAN 609

Query: 652 SLRQTEIAIDEFLANFPNRIIGRALRVLMMPFGRVRKAPSDKLDSKLAQILQTPSETRSR 711
            L     A+++ + NFPNR +   LR L+ P G    APSDK+ ++L   +  PS  R R
Sbjct: 610 RLHLAAKALEDVIRNFPNRPVAWLLRALIFPIGNHFNAPSDKMATELVSGMLKPSPARER 669

Query: 712 IGRHQYLTPSDNNPAG---KIEQALNVILQAEPLFEKACKA-----LGQRRPFMGLDEVA 763
           I    +L P      G   ++EQA       + +++K  KA     L  + P + L   A
Sbjct: 670 I---TFLCPEFEGDVGGIAEVEQAFVAQYACKEIYKKLKKAQRSGELPAKVPNLVLFAKA 726

Query: 764 KLGLEAKVLTIQEAALLSEAEAHRLYTINVDDF 796
              LE   ++  E   L  A+  RL  INV+DF
Sbjct: 727 ---LEQGTISNDEHQTLLHADKLRLAAINVNDF 756