Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (270), Expect = 3e-28
 Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 17/176 (9%)

Query: 343 QMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPL------SLAVIDL 396
           Q + RG  ++LED+   D+LTG +NR+ F       + LA++E + L       LA+IDL
Sbjct: 190 QDTLRGMMRQLEDLVATDELTGLFNRRHF-------LRLASRELNTLRPGIAHGLALIDL 242

Query: 397 DHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRM 456
           DHFK++ND +GH AGD VLQ   A+    + +   L R+GGEEFV+LLP    Q      
Sbjct: 243 DHFKRINDLHGHAAGDQVLQAFAAVATACLREGDVLARYGGEEFVMLLPACDPQRLTACC 302

Query: 457 ESIR---AEIAMHASQ-PQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNK 508
           E +R    E+ +   Q   +++S G+      + L +   RADQA+Y AK +GRN+
Sbjct: 303 ERLRLAFTEVELIGLQVGALSLSAGMTMLGMGDDLDNALQRADQALYRAKRDGRNR 358