Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  116 bits (290), Expect = 2e-30
 Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 15/176 (8%)

Query: 343 QMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQV 402
           Q + RG  ++LED+A  D+LTG YNR+ F  + +  +S   K  H   LA+IDLDHFK+V
Sbjct: 196 QDTLRGMMRQLEDLASTDELTGLYNRRRFLRIAEGELSRLRK-GHQFGLALIDLDHFKRV 254

Query: 403 NDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQ----------EA 452
           ND +GH AGD VLQ   ++ +  +     L R+GGEEFV+LLP    +          EA
Sbjct: 255 NDIHGHAAGDRVLQTFASVARSCLRDADVLARYGGEEFVLLLPDTDAEQFSACCERLREA 314

Query: 453 YQRMESIRAEIAMHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNK 508
           + + E    +IA       +++SIG+      + L     RAD+A+Y AK  GRN+
Sbjct: 315 FSKAEPEEVDIA----AGHLSLSIGLTLVNAGDDLDAALQRADEALYRAKRAGRNR 366