Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (292), Expect = 1e-30
 Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 6/164 (3%)

Query: 352 RLEDMAVR---DKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGH 408
           R++D+  R   D LTG YNR+ F+E +      A +   PLSL V+D+D+FKQ ND+ GH
Sbjct: 398 RMQDIKRRNHIDVLTGLYNRRFFDEQLQQEYLKACRRHQPLSLLVLDIDYFKQFNDSRGH 457

Query: 409 PAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEIAMHAS 468
             GD  LQ V  +    + + G  CR+GGEEF ++LP  +  EA Q  E IR ++     
Sbjct: 458 AEGDKALQLVADILAGTVQKPGMACRYGGEEFALILPETSAGEAMQLAERIREKVVRDTK 517

Query: 469 QP-QVTVSIGVVQY--QQNESLLHLFNRADQAMYTAKSEGRNKV 509
           +  ++TVSIG  ++  +Q+ S   LF  AD+A+Y AK++GRN V
Sbjct: 518 ERIELTVSIGCSEFDAKQHLSGFALFEAADEALYRAKADGRNCV 561