Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  112 bits (281), Expect = 3e-29
 Identities = 73/193 (37%), Positives = 110/193 (56%), Gaps = 8/193 (4%)

Query: 326 GNLAISAFVALGVLGLAQMSFRGYQKRLEDM--AVRDKLTGAYNRQVFEELVDDAISLAN 383
           G+L IS  +A   L L+     G  +R + M  A RD LTG YNR   +E  ++A+    
Sbjct: 379 GSLMISTVLAGITLFLSVFLATGLSQRNKYMRLAQRDGLTGTYNRATGQEKGENALIGCM 438

Query: 384 KESHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVL 443
               P +  ++DLD+FK++ND +GH  GD  L++VV + +  +A    LCR+GGEEF+++
Sbjct: 439 ARGEPTAAVLLDLDNFKRINDEFGHATGDWTLKKVVEVIRPQLADDHILCRFGGEEFMLI 498

Query: 444 LPHMTQQEAYQRMESIRAEIA---MHAS--QPQVTVSIGVVQYQQNE-SLLHLFNRADQA 497
           LP ++  +A +  E  R  IA    H S    ++T S GV ++Q  + SL  +  RAD A
Sbjct: 499 LPGLSGAQAVEVAERCREAIAGVNTHYSGHSFKLTASFGVTEWQHGDLSLDPMIKRADLA 558

Query: 498 MYTAKSEGRNKVV 510
           +Y AK  GRN+VV
Sbjct: 559 LYRAKHLGRNRVV 571