Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (280), Expect = 3e-29
 Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 8/170 (4%)

Query: 349 YQKRL---EDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDN 405
           Y++RL   + + + D LT   NR   EE ++       +  HPL +AV D+DHFK +NDN
Sbjct: 346 YKERLFEQQKLNLLDTLTQLPNRAALEERMEQEFRNYQRHRHPLWVAVADIDHFKSINDN 405

Query: 406 YGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEI-- 463
           +GH  GD  LQ +    +  + +   + R+GGEEFV+L+P ++  +  Q +  +R ++  
Sbjct: 406 FGHSTGDKTLQVIAMALKNSLRESEFVARYGGEEFVLLIPDVSANDIEQLLNRVREKVKN 465

Query: 464 ---AMHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKVV 510
                   +  VTVSIG  Q  +NE +   F RAD A+Y AK E R++V+
Sbjct: 466 IPFKFKNQRITVTVSIGAAQILENEQISETFERADAALYKAKHESRDRVI 515