Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (277), Expect = 7e-29
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 4/165 (2%)

Query: 350 QKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHP 409
           + + +  A  D LT   NR+     +  AIS +N++  PL++ + D+DHFK VND +GH 
Sbjct: 330 EMQYKSQANTDPLTKVANRRAINRQLAAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHL 389

Query: 410 AGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEIAMHAS- 468
            GD VLQRV  +    I +   + RWGGEEFV++L    ++ A    + +R E+   +  
Sbjct: 390 VGDDVLQRVAKIFSDAIRKTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQG 449

Query: 469 ---QPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKVV 510
                 +T+S GV  Y Q++    LFN ADQA+Y AK  GR+ VV
Sbjct: 450 IDFPVAITLSAGVSVYCQDDKQDCLFNHADQALYRAKESGRDCVV 494