Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  117 bits (294), Expect = 1e-30
 Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 6/164 (3%)

Query: 352 RLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHPAG 411
           RLE +A  D+LTG  NR+ F   ++D  + A +   PLS+ ++D DHFK +ND +GH AG
Sbjct: 506 RLEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAG 565

Query: 412 DLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIR-----AEIAMH 466
           D+VL+ +  +    + +   + R GGEEF VLLP   Q+ A +  E IR     A +A+ 
Sbjct: 566 DMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPVAVR 625

Query: 467 ASQPQVTVSIGVVQYQ-QNESLLHLFNRADQAMYTAKSEGRNKV 509
                 TVS+G  +Y+  N+SL  L  RAD  +  AK EGRN+V
Sbjct: 626 DVWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRV 669