Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  114 bits (284), Expect = 5e-30
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 15/202 (7%)

Query: 316 NHDIWFKATLGNLAISAFVALGV-LGLAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEEL 374
           ++D W    +   +I  F  +G  +G  ++       RLE +++ D LTG YNR+ FE  
Sbjct: 45  DYDFWLFLYISVGSILVFTGMGGWVGREEL-------RLERLSLVDPLTGLYNRRSFETA 97

Query: 375 VDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCR 434
           ++  ++   +   P++L ++DLDHFK VND +GH AGD VLQ +  L    +       R
Sbjct: 98  LEKEMARWRRREAPVALLMLDLDHFKLVNDTWGHQAGDRVLQTLARLLSSTVRIEDLPAR 157

Query: 435 WGGEEFVVLLPHMTQQEAYQRMESIRAEIAMH-----ASQPQVTVSIGV--VQYQQNESL 487
            GGEEF V++P +T  EAYQ  E +R  +A H         +V VSIGV   + Q     
Sbjct: 158 VGGEEFAVIMPEVTGDEAYQAAERLRLVVAGHLFDIGVESIEVRVSIGVACTEMQNVADG 217

Query: 488 LHLFNRADQAMYTAKSEGRNKV 509
             L   AD+A+Y AK  GR++V
Sbjct: 218 ATLVRLADEALYRAKQRGRDRV 239