Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (279), Expect = 3e-29
 Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 6/173 (3%)

Query: 344 MSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVN 403
           +S R   K LE +A  D LTGA NR+VF + +  A++  ++        ++D+DHFK +N
Sbjct: 168 ISLRLQLKELEYLASTDHLTGAANRRVFTQKIRQAMTEFHENGQSFFFGLMDIDHFKMLN 227

Query: 404 DNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEI 463
           D +GH AGD VLQR+VA+ +  +   G   R GGEEF ++ P  ++ E  +    IR  I
Sbjct: 228 DQFGHSAGDYVLQRIVAISETMMTSPGKFFRIGGEEFAIIFPEQSEYEPLRFFNDIREAI 287

Query: 464 AMHASQ-----PQVTVSIG-VVQYQQNESLLHLFNRADQAMYTAKSEGRNKVV 510
           A+ A         V+VSIG    +  + +   L  R+D+A+Y AK  GRN+V+
Sbjct: 288 ALAAMDYDGIPISVSVSIGFTAMHIHDNTPESLLRRSDKALYQAKLAGRNRVL 340