Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  507 bits (1306), Expect = e-148
 Identities = 247/474 (52%), Positives = 335/474 (70%), Gaps = 5/474 (1%)

Query: 42  RKKFSWILVTLIIFGFFVTSLVSYKVAHDTLEEQINKDSLPLTSDNIYSEIQQDLIRPIF 101
           +KKF W+L  L++  F VTS +SYKVAHD+L +QI  ++LPLTSDNIYSEIQQDL+RPIF
Sbjct: 9   KKKFIWLLSVLLLVAFLVTSGISYKVAHDSLSQQIESNTLPLTSDNIYSEIQQDLLRPIF 68

Query: 102 ISSLMAQDTFVREWTLAGEQDPERIIRYLREIQRQYQTISSFYISDRTGHYYHYTGILKQ 161
           ISSLMAQDTFVR+W L  EQ+PE+++RYL+EIQ +Y T++SF++S+++ +YYH TGILK+
Sbjct: 69  ISSLMAQDTFVRDWMLNHEQEPEKLVRYLKEIQEKYDTVTSFFVSEQSRNYYHSTGILKK 128

Query: 162 VSESNPNDAWFYRVKNSAPDKNFEVNIDIDTANSQQTVVFVNYKVFDFENRFLGVIGVGL 221
           + + +PNDAW++RV++    +++E+NID DTA+  +T VFVNYKVFDFE +F+GV GVGL
Sbjct: 129 IQDIDPNDAWYFRVRSLPESEHYEINIDSDTADRTKTTVFVNYKVFDFEGKFIGVTGVGL 188

Query: 222 SSDAVSALVEKYQKRYNRHIYFINELGEVTLHGSHHPGFDQIQQREGLKTLATQILTSPS 281
           + + V AL+E YQKRYNR ++F +  G VTLHG  + G D +Q   GL+ LAT+ILTSPS
Sbjct: 189 AVEKVKALIELYQKRYNRRVFFTDRQGRVTLHGDEYDGADSLQTSAGLEQLATRILTSPS 248

Query: 282 VGASYYADGQKVYLNSRWVDEFQWYIIVEQKDEFNHDIWFKATLGNLAISAFVALGVLGL 341
              SY  +G+  YLNSR V EF+WY+IVEQ+D            GNLA+S  V +G+L +
Sbjct: 249 AAFSYQRNGKTAYLNSRLVPEFKWYLIVEQEDAPQEQELLNTFWGNLALSLLVTIGILLI 308

Query: 342 AQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQ 401
           + M+   YQ++LE MA  DKLTGA NRQVFEE    A+  A     P+S+ ++D+DHFK+
Sbjct: 309 SNMTLGRYQRKLEVMASTDKLTGAANRQVFEEYFHQALEKAKLSQAPISILLVDIDHFKK 368

Query: 402 VNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIR- 460
           VND+YGH  GDLVL+ V  L +  +     LCRWGGEEF++L+P     +A +  E  R 
Sbjct: 369 VNDSYGHSIGDLVLKTVANLLRSQLKNQDVLCRWGGEEFLILVPEQDLSQAAELAEQFRD 428

Query: 461 ----AEIAMHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKVV 510
                E+ ++     +TVSIGV +YQ+ E    L  RAD A+Y AK  GRN+VV
Sbjct: 429 LISQRELKVNGVHIAITVSIGVAEYQKLEPAEDLIKRADLALYQAKEAGRNQVV 482