Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (287), Expect = 3e-30
 Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 1/185 (0%)

Query: 325 LGNLAISAFVALGVLGLAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANK 384
           L    IS+  AL    +A +  +   ++L + ++ D LTG  NR+ F+   +   +   +
Sbjct: 134 LNQRQISSLQALSRQVIAILELKKVGEQLHNTSMTDALTGVNNRRAFDLKFEAEFARWQR 193

Query: 385 ESHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLL 444
                 LA+ID+DHFK  ND+YGH AGD  L +V AL QRH        R+GGEEFV++L
Sbjct: 194 TGQSFVLALIDIDHFKSFNDSYGHAAGDEALSQVAALFQRHSRNYDFFARYGGEEFVLIL 253

Query: 445 PHMTQQEAYQRMESIRAEIAMHA-SQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKS 503
           P      A + +E +R  +A H     Q+TVSIG+      +    L   ADQ +Y AK+
Sbjct: 254 PGTDTASANKTLEKLRLVVANHEWLLRQLTVSIGLASADLFDDKKQLLEVADQMLYKAKT 313

Query: 504 EGRNK 508
           +GRN+
Sbjct: 314 QGRNQ 318