Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Pseudouridine synthase, Rsu (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (276), Expect = 3e-29
 Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 19  KRLNKFISETGYCSRREADKLIEQGRVTLNGLQPEV-GSKVTEQDEVCIDGKPLRSKERP 77
           +R+ K I+  G CSRR+A+KLI +GRVTLNG + E   + V   D V +DGKPL + E  
Sbjct: 6   ERIAKVIARAGICSRRDAEKLIVEGRVTLNGRKVETPATLVAASDTVTVDGKPLPALEPA 65

Query: 78  IYIALNKPTGITCTTERDVPGNIVDF---IGHHKRIFPIGRLDKPSDGLIFLTNDGDIVN 134
                NKP G+  T+ RD  G    F        R+  +GRLD  S+GL+ LTNDG++  
Sbjct: 66  RLWRYNKPIGLV-TSHRDEQGRPTVFERLPATLPRVISVGRLDLNSEGLLLLTNDGELAR 124

Query: 135 KILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYS----FRIV 190
           ++        + Y VRV     P  +  +  GV +        +V  E Q        + 
Sbjct: 125 RLEHPSQGWLRRYRVRVHGAPDPVKLAALEKGVTVEGVAYGSIRVALERQQGANAWLSVS 184

Query: 191 LTQGLNRQIRRMCEALGYEVFKLRRV 216
           L +G NR+IRR+ E LG  V +L RV
Sbjct: 185 LREGKNREIRRVMEHLGLPVSRLIRV 210