Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., 23S rRNA pseudouridine synthase F from Klebsiella michiganensis M5al

 Score =  274 bits (701), Expect = 2e-78
 Identities = 151/283 (53%), Positives = 186/283 (65%), Gaps = 6/283 (2%)

Query: 13  MSQPTEKRLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLR 72
           M   +  RLNK+ISE+G CSRREAD+ IEQG V +NG +  +G +V   D V ++G+ + 
Sbjct: 1   MLPDSSTRLNKYISESGICSRREADRFIEQGNVFINGKRATIGDQVKAGDVVKVNGRLIE 60

Query: 73  SKERP--IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDG 130
            +E    + IALNKP GI  TTE     NIVDF+ H KRIFPIGRLDK S GLIFLTN G
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 131 DIVNKILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIV 190
           D+VNKILRAGN+HEKEY+V VDK IT EFIR M +GV IL TVT  CKV +E  + FRI 
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKLITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 191 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250
           L QGLNRQIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E SS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLTGIPLGEWRDLTDDELIDLFKLIESSS 240

Query: 251 GTEEASRVAQSGDT-IKRATDAKLFDSREANKESKARRNPKTY 292
              +    A+     IKR   A     +   K S+   N K +
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVA---IEKSGEKSSRPASNGKRF 280