Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Dual-specificity RNA pseudouridine synthase RluF from Enterobacter sp. TBS_079

 Score =  277 bits (709), Expect = 2e-79
 Identities = 142/238 (59%), Positives = 176/238 (73%), Gaps = 3/238 (1%)

Query: 16  PTEK-RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPL--R 72
           PT+  RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  R
Sbjct: 3   PTQSTRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVVPGDVVKVNGQLIEPR 62

Query: 73  SKERPIYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDI 132
             E  ++IALNKP GI  TTE     NIVDF+ H  RIFPIGRLDK S GLIFLTN GD+
Sbjct: 63  DAEDLVFIALNKPVGIVSTTEDGERDNIVDFVNHSSRIFPIGRLDKDSQGLIFLTNHGDL 122

Query: 133 VNKILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLT 192
           VNKILRAGN+HEKEY+V V+KP+T +FIR M +GV IL TVT  CKV +E  ++FRI L 
Sbjct: 123 VNKILRAGNDHEKEYIVTVNKPVTDDFIRGMGAGVPILGTVTKKCKVKKEAPFAFRITLV 182

Query: 193 QGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250
           QGLNRQIRRMCE  GY+V KL R RIMN++L GIP G+WR L++ E+ E+  + E+SS
Sbjct: 183 QGLNRQIRRMCEHFGYDVVKLERTRIMNVSLSGIPLGEWRDLTDDELIELFRLIENSS 240