Pairwise Alignments

Query, 192 a.a., DNA endonuclease SmrA from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., Smr domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (256), Expect = 2e-27
 Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 4/179 (2%)

Query: 1   MSQEDLELFQQMMGDVKTITHDTVELKKAHQVTEAQLAK-REAAVSLADHDP-EALSIDH 58
           M  +D  LF+  +  VK I HD  E  K  +   AQ+AK R+AA    D    + LS   
Sbjct: 1   MQDDDFSLFKSAIQGVKPIKHDRAETGKP-KADRAQIAKLRQAATVRNDATTVDGLSDQF 59

Query: 59  APMLKPDDMLEFKRDGVQDGVYRKLRLGKYPIQARLDLHRKTLKEARSEVIQFIRQCMAM 118
              + P+D L + RDGVQ+   RKL++G+ P +  LDLH  T+++AR  +  F+ +    
Sbjct: 60  VIDVGPEDELMWARDGVQESQMRKLKVGQIPFEGSLDLHGMTVEKARETLWAFLAEATKF 119

Query: 119 DIRTLLIVHGRGER-STPPALMKSFVSHWLTQISEVQCAHSAQRLHGGTGAVYVLLRKS 176
           +IR + + HG+  R      ++KS V+ WL Q  +V    S Q  HGG GAVYV+L+++
Sbjct: 120 EIRCVRVTHGKAVRLDGKRPMIKSHVNTWLRQHPQVLGFTSCQAKHGGAGAVYVMLKRT 178