Pairwise Alignments

Query, 192 a.a., DNA endonuclease SmrA from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Smr domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (267), Expect = 2e-28
 Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 6/193 (3%)

Query: 1   MSQEDLELFQQMMGDVKTITH-DTVELKKAHQVTEAQLAKREAAVSLADHDPEALSIDHA 59
           + +E+L+LF   M DV  +   D     ++    EA   +REAA S  D   E L I  A
Sbjct: 24  VQREELDLFMAEMADVIPLKEADRHHFLQSTCDDEAAKIRREAADS--DERLELLPIHPA 81

Query: 60  PM--LKPDDMLEFKRDGVQDGVYRKLRLGKYPIQARLDLHRKTLKEARSEVIQFIRQCMA 117
            +  +K  +++ F R+GVQ+ V ++LRLG+Y  + R D     LKEAR  ++  I   + 
Sbjct: 82  ELTRVKGAEVVSFSREGVQEAVLKQLRLGRYEAKVRHDFRGLKLKEAREVLLGLIDSALF 141

Query: 118 MDIRTLLIVHGRGERSTP-PALMKSFVSHWLTQISEVQCAHSAQRLHGGTGAVYVLLRKS 176
              R LL++ G+G  + P  ALMKS +  WL+++ +V   HSA +  GG GA+YV+LRKS
Sbjct: 142 RGDRNLLLIPGKGSGNQPFEALMKSALCTWLSRLEDVSAYHSAIKEEGGAGALYVMLRKS 201

Query: 177 AEKKAENRERHQK 189
              K  +RE ++K
Sbjct: 202 DAAKVHSRETNRK 214