Pairwise Alignments

Query, 192 a.a., DNA endonuclease SmrA from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., Smr domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (331), Expect = 5e-36
 Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 7/182 (3%)

Query: 12  MMGDVKTITHDTVELKKAHQVTEAQLAKREAAVSLADHDPEALSIDHAPMLKPDDMLEFK 71
           + GD+K +      L    Q+      +REA ++        L +   P++ PDD++ FK
Sbjct: 19  LKGDIKAVNLQPKALT-VEQIQRRDALQREAYLACMP-----LELSLIPIIAPDDIVSFK 72

Query: 72  RDGVQDGVYRKLRLGKYPIQARLDLHRKTLKEARSEVIQFIRQCMAMDIRTLLIVHGRGE 131
           R+GVQ GV+++LRLG+Y I+  LD+H   L +AR  ++ ++   +A   R ++++HG+G 
Sbjct: 73  REGVQGGVFKRLRLGQYSIKMELDVHAYRLSQAREALLNYLLAALAHGERCVMLIHGKGH 132

Query: 132 RSTPPA-LMKSFVSHWLTQISEVQCAHSAQRLHGGTGAVYVLLRKSAEKKAENRERHQKR 190
            S P A L+KS V HWL+Q+  V   HSA+   GGTGA+YV+L KS + K EN+E ++K 
Sbjct: 133 NSKPVAGLLKSAVCHWLSQLEMVLAYHSAKTEQGGTGALYVMLTKSEQLKIENKEANRKG 192

Query: 191 LG 192
           +G
Sbjct: 193 MG 194