Pairwise Alignments

Query, 192 a.a., DNA endonuclease SmrA from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., Smr protein/MutS2 (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 1e-35
 Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 2/194 (1%)

Query: 1   MSQEDLELFQQMMGDVKTITHDTVELK-KAHQVTEAQLAKREAAVSLADHDPEALSIDHA 59
           M  ++  LF + M  V  +  D   +  +   +TE QL +R+A    A      L +   
Sbjct: 1   MLDDESALFFEEMAGVVPLKGDVKAVNLQPKALTEEQLQRRDALQREAYLACMPLDLSLI 60

Query: 60  PMLKPDDMLEFKRDGVQDGVYRKLRLGKYPIQARLDLHRKTLKEARSEVIQFIRQCMAMD 119
           P++ PDD+  FKR+GVQ  V+++LRLG+Y I+  LD+H   L +AR  ++ ++    A  
Sbjct: 61  PIIAPDDIASFKREGVQGAVFKRLRLGQYSIKMELDVHAYRLSQARDALLNYLLAAQAHG 120

Query: 120 IRTLLIVHGRGERSTPPA-LMKSFVSHWLTQISEVQCAHSAQRLHGGTGAVYVLLRKSAE 178
            R ++++HG+G  S P A L+KS V HWL+Q+  V   HS +   GGTGA+YV+L KS +
Sbjct: 121 ERCVMLIHGKGHNSKPVAGLLKSAVCHWLSQLDMVLAYHSTKTEQGGTGALYVMLTKSEQ 180

Query: 179 KKAENRERHQKRLG 192
            K EN+E ++K +G
Sbjct: 181 LKIENKEANRKGMG 194