Pairwise Alignments

Query, 298 a.a., TraB/GumN family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 1e-27
 Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 38/289 (13%)

Query: 20  LWLF--IQPLHAE-----PLYWSATKGSTQLILLGSLHVGSDQLYPLPDQLAQKLKQSAG 72
           LW+   + PL A+     P Y  + +G T + LLGS+HVG    YP+P  +      +  
Sbjct: 16  LWMLSAMAPLLAKESDKPPFYEFSYQGKT-VYLLGSIHVGRPDFYPMPKVVESAFDSAEA 74

Query: 73  LVVETDIRHQ-SNITLPATTLSSEQVLSDEQ-LFVLDGIAQQLRLDAQQIRQQPPWSASL 130
           LVVE DI    ++I     T   +    D Q   V++      +   + +    PW  + 
Sbjct: 75  LVVEADIGAAGTDIQRLLMTYGVDASTPDAQSAAVVETYCSSRKPVCEAMAPLSPWIQAS 134

Query: 131 ILQMRQFLEMGYQADRGIDLYFMQQAEQHQLPILSLETLQFQVDLLAHLPNSGQELLV-- 188
            + + +F E+GYQA+ G+D +F+ +A   +  I  LE +++Q  L+A L  S Q  +V  
Sbjct: 135 QITVLRFAELGYQAELGVDQHFLGRARNSKA-IFELEGMEYQFKLMASLDKSQQWAMVRE 193

Query: 189 ----------SLIDEWE--NNTQLTECMIESWKKGDEKNLLQMLTLTGMSAELEAHMLTE 236
                     +L+D W   N+ +L   M +S  +GD+  LL+ L             L +
Sbjct: 194 AISAPGEDADALVDSWRGGNSDELAALMHDSMAEGDDTQLLKAL-------------LWD 240

Query: 237 RNRDWAEKLTHPQFLPQQGKPYLVVVGTLHLIGKQSLLSILEQKGFSIQ 285
           RN   A+ L      P+     +VVVG  HL+G+QSL+SIL Q+G  ++
Sbjct: 241 RNHGMADTLQSLLTRPETPSSLMVVVGAGHLVGEQSLVSILAQRGIRVK 289