Pairwise Alignments

Query, 298 a.a., TraB/GumN family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., GumN family protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 11/249 (4%)

Query: 30  EPLYWSATKGSTQLILLGSLHVGSDQLYPLPDQLAQKLKQSAGLVVETDIRHQSNITLPA 89
           +P ++  +    Q  LLGS+H+G    YP+ +Q+     ++  L VE D  ++++I    
Sbjct: 31  KPPFYKISYQGKQTFLLGSIHIGQAGFYPMAEQIEVAFAKAGALAVEAD-TNKADIMGLI 89

Query: 90  TTLSSEQVLSDEQLFV-LDGIAQQLRLDAQQIRQQPPWSASLILQMRQFLEMGYQADRGI 148
                 QV +D +    L+   +        ++   PW  ++   + +F  +GYQA  G+
Sbjct: 90  RKYGLAQVAADAKTQARLEEYCRTRSEICTPMQPYAPWMQAMQFSVMRFASLGYQAQWGV 149

Query: 149 DLYFMQQAEQHQLPILSLETLQFQVDLLAHL-PNSGQELLVSLIDEWENNTQLTECMIES 207
           D   M  ++  Q P++ LE+ ++Q  L+A   P    E+++  ID  +        +I++
Sbjct: 150 DQ--MLLSKNGQRPVIELESTEYQFKLMASFSPQMQWEMVLEAIDAPDEEMVQ---LIKA 204

Query: 208 WKKGDEKN---LLQMLTLTGMSAELEAHMLTERNRDWAEKLTHPQFLPQQGKPYLVVVGT 264
           W+ GDE     L+Q   L     EL   ML +RN     K+           P  VVVG 
Sbjct: 205 WRSGDEAGLDALMQGQMLHDGDKELIDKMLWQRNEQMTAKIRSLMMQQDGPSPLFVVVGA 264

Query: 265 LHLIGKQSL 273
            H++G + +
Sbjct: 265 GHVVGDKGI 273