Pairwise Alignments

Query, 298 a.a., TraB/GumN family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 18/270 (6%)

Query: 26  PLHAEPLYWSATKGSTQLILLGSLHVGSDQLYPLPDQLAQKLKQSAGLVVETDIRHQSNI 85
           P    P Y    +G +   LLGS+H+G    YP+P Q+     +S GLVVE D+    + 
Sbjct: 27  PSDKPPFYRVQWQGKSAY-LLGSIHIGRADFYPMPAQVEAAFTKSKGLVVEIDMNKVDSR 85

Query: 86  TL--PATTLSSEQVLS----DEQ-LFVLDGIAQQLRLDAQQIRQQPPWSASLILQMRQFL 138
            L       +S Q L     D+Q +  +    +      Q I+   PW  +    + ++ 
Sbjct: 86  ALLQKYGGANSAQGLDWQSRDKQTVATMSQYCEGKASLCQSIQAFAPWLQAAQFNLLRYN 145

Query: 139 EMGYQADRGIDLYFMQQAEQHQLPILSLETLQFQVDLLAHLPNSGQELLVSLIDEWENNT 198
            +G+  D G+D+  + +  +   P+  LET + Q  LLA   +  Q  +V    +  +  
Sbjct: 146 GLGFSTDYGVDMQLLSRGGK---PVYELETAESQFQLLASFDSQIQWAMVREAIDASDAE 202

Query: 199 QLTECMIESWKKGDEKNL----LQMLTLTGMSAELEAHMLTERNRDWAEKLTHPQFLPQQ 254
            L+  ++++W+ G+E  L     + L   G +  L+  +L +RN+  AE +         
Sbjct: 203 LLS--LVDAWRSGNETVLDTLMQEQLGGDGNTLMLD-KILWQRNKVMAEGMIKLMGSETA 259

Query: 255 GKPYLVVVGTLHLIGKQSLLSILEQKGFSI 284
            +P  VVVG  H++G +S++ +L+Q+G ++
Sbjct: 260 SEPLFVVVGAGHVVGDKSVVQLLKQQGATV 289