Pairwise Alignments

Query, 298 a.a., TraB/GumN family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., conjugal transfer protein TraB from Klebsiella michiganensis M5al

 Score =  110 bits (274), Expect = 4e-29
 Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 9/241 (3%)

Query: 39  GSTQLILLGSLHVGSDQLYPLPDQLAQKLKQSAGLVVETDIRHQSN--ITLPATTLSSEQ 96
           G   L L+GS+H+G+  + P P +L +K++Q+  L+VE DI         LP+    +E+
Sbjct: 30  GERYLHLVGSIHMGTRDMSPPPARLLKKIRQADALIVEADISGSETPFSNLPSCPPLAER 89

Query: 97  VLSDEQLFVLDGIAQQLRLDAQQIRQQPPWSASLILQMRQFLEMGYQADRGIDLYFMQQA 156
            LS  QL  L   A ++ L       QP W  +++LQ  Q  ++G +AD GID   +  A
Sbjct: 90  -LSPSQLAELQDRAGEMGLSIALFDNQPLWQVAMVLQATQAQKLGLRADYGIDYQLLMAA 148

Query: 157 EQHQLPILSLETLQFQVDLLAHLPNSGQELLVSLIDEWENNTQLTECMIESWKKGDEKNL 216
            +  + ++ LE    Q+ LL  LP+ G  LL   +  W  N +L + MI  W +      
Sbjct: 149 RESHIRVMELEGADSQIALLRDLPDGGLALLEDTLTHWRTNARLLQVMIGWWLEQPPSQG 208

Query: 217 LQMLTLTGMSAELEAHMLTERNRDWAEKLTHPQFLPQQGKPYLVVVGTLHLIGKQSLLSI 276
              L  T  S  L   ++ +RN  W E L     L      Y+V VG LHL G+ +L  +
Sbjct: 209 TTSLPTT-FSQSLYDVLMHQRNLAWRETL-----LALPPGRYVVAVGALHLYGEGNLPDM 262

Query: 277 L 277
           L
Sbjct: 263 L 263