Pairwise Alignments

Query, 883 a.a., beta-N-acetylhexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 884 a.a., Beta-N-acetylhexosaminidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  603 bits (1554), Expect = e-176
 Identities = 363/933 (38%), Positives = 530/933 (56%), Gaps = 100/933 (10%)

Query: 2   LKKSLISIAVFTSL--SGCALNTTSPQEV-----------VDTLANNLDVQYQVVNNHGA 48
           +K SL + A+F +L  SGC+     P  V           +   A+ LDV+Y+VV N   
Sbjct: 1   MKFSLAASAIFLALGVSGCSQAPVEPAAVAAEPSVLTQASLQAFADGLDVKYRVVTNRPD 60

Query: 49  DTGLACQTLEAEWASCNQVNMTLVNRGEAVNSKDWAIYFHSIRLILDVGNDQFKITRVTG 108
           +    C+  +A    C Q  + L +  +  + +D+ IY+  +R +  V +  F I  V G
Sbjct: 61  EQ---CKK-DAGEGRCFQAEIVLTSPID-FDGRDFEIYYSQMRPVQSVQSTDFVIEHVKG 115

Query: 109 DLHKLEPTDKFDGFAAGETVTLPLIGEYWTLFETDFMPRAFVTAPDAEPKVIAALNTEDV 168
           DLH+++PT  F GF A ++ TL   GE W L ETD MP  ++TAP  +P VIA+  T   
Sbjct: 116 DLHRIKPTGNFGGFKANQSQTLAFRGELWQLSETDAMPNYYITAPGLKPVVIAS--TRLA 173

Query: 169 ASFVSGLE-----------GENLKRTPSDNNVFAQALSRFEKNSDVALQDVTHA--LIPT 215
               +GLE            +  +RT +D   +A A   FE N  + +     A  ++P 
Sbjct: 174 VEAETGLELRPYVEAFTDADKQYRRTDNDKLPWATAPVLFEANQSLVVDPAAAAQRIVPA 233

Query: 216 PLQ--VKSHSGSVSIAKGIALP-SKAFDGEQMQALNERAQLLGVNLKGVMPAQVIINPKS 272
           P+    ++  G++ ++ GIA+   +  D   + A   R   LG+  +    A++    K 
Sbjct: 234 PVSQTFEAGLGTLDLSGGIAVELPQGLDKAAIDAALARLARLGIE-EDSSGARI----KL 288

Query: 273 FKGDLAKSGAYRLAITDKAVKVTAFDQAGAFYAMQSLLGLVDMADATQLPKVEIVDAPRF 332
              D   + AY+L I  +  ++ A   AG  Y + SL  LV       +    I DAPR+
Sbjct: 289 VSDDSLGAEAYQLVIRPEGAEIKAATDAGFAYGLSSLAALVQPGKPA-ISAQTITDAPRY 347

Query: 333 DYRGVMVDVARNFHSKQAILATLDQMAAYKMNKLHLHLTDDEGWRIEIPGLPELTDIGAQ 392
            +RG+ VDV+RNFHSK  +L+ LDQMAAYK+NKLHLH+ DDEGWR+EI GLPELT+IG++
Sbjct: 348 GFRGMHVDVSRNFHSKAFMLSLLDQMAAYKLNKLHLHMGDDEGWRLEIDGLPELTEIGSK 407

Query: 393 RCFDPSETECVLPQLGSGPNADNFGSGYFTKQDYLEILQYAKARHIEVIPEIDMPAHARA 452
           RC D +E  C+LPQLGSGP+AD   +G+++K DY+EIL+YA AR I+VIP +DMP H+RA
Sbjct: 408 RCHDLAEDTCLLPQLGSGPDADVKVNGFYSKADYIEILKYASARQIQVIPSMDMPGHSRA 467

Query: 453 AVVSMEARYQRLMQEGNEAAANEFRLLDPQDTSNVTTVQFYDRMSFINPCLDSSKRFVDK 512
           AV +ME RY+RL + G+   A E+RL+DP+D +  +++Q+YD  + +N C++S+  FVDK
Sbjct: 468 AVKAMEVRYRRLAEVGDIKGAEEYRLIDPEDKTVYSSIQYYDD-NTLNVCIESTYHFVDK 526

Query: 513 VISEIAAMHQAAGMPLTTWHFGGDEAKNIKLGAGFQDVNTQEPVSWKGNLDLSKQDKPFA 572
           VI EIA +H+ AG PLT +H G DE                   +W              
Sbjct: 527 VIDEIAKLHKEAGQPLTRYHIGADETAG----------------AW-------------L 557

Query: 573 RSPQCQNLIATG--AVSDFGHLPSYFAEQVSKLVAEKGIPNFQAWQDGLKYSEGEKAFAT 630
            SP+C+  +A     V++   L +YF E+V+ ++ +KGI     W DG+ ++  EK  A 
Sbjct: 558 ESPKCEAFVANNDKGVTNKSELGAYFIERVANVLHDKGIEP-AGWSDGMSHTRPEKMPAM 616

Query: 631 ENTRVNFWDVLYWGGSASAYEWAEKGYDVIISNPDYVYMDMPYEADPKERGYYWATRATD 690
             +  N WDV+   G   A++ A  G+++++SNP+ +Y D PYEADPKE GYYWA+RAT+
Sbjct: 617 NQS--NIWDVVAHKGHQRAHKQANLGWEIVLSNPEVLYFDFPYEADPKEHGYYWASRATN 674

Query: 691 TRKMFGFAPENLPQNAETSLDRDGNGFSG--------KGEV------KGKPFYGLSAQLW 736
           ++K+FGF P NLP NAE  LD + N F           G+V       GK FYG+  QLW
Sbjct: 675 SQKVFGFMPGNLPANAEQWLDIENNPFEADDTKQQDEAGKVLSEPMQPGKAFYGVQGQLW 734

Query: 737 SETVRTDEQYEYMVFPRVLAAAERAWHRAEWENAYK-VGVEYSQETQLVNHKA---LNAD 792
           SET+R+DEQ +YM+FPR+L  AERAWH+  WE  Y   G  Y+Q +   + +A     AD
Sbjct: 735 SETIRSDEQAQYMIFPRLLMLAERAWHKPGWEVPYNHEGALYNQSSGSFSAEARALQAAD 794

Query: 793 WNRFANVLGQRELAKLEKAGIDYRLPVPGAKIENGHLAMNVQFPGVTLQYSLDGQTWLDY 852
           W + AN LG +ELAKL+ AG+ YR+P  GA+IE+G L+ N+ FPG+ ++Y      W  Y
Sbjct: 795 WQQMANTLGHKELAKLDLAGVHYRVPTVGARIEDGKLSANIAFPGLGIEYREADGNWQPY 854

Query: 853 DAKQAPKVSGE--VWIRSVSASGERTSRVTSLK 883
               AP V  +  V +R ++A G+R  R   +K
Sbjct: 855 ---LAPVVVTKLPVEVRGIAADGKRKGRTLKVK 884