Pairwise Alignments

Query, 883 a.a., beta-N-acetylhexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 888 a.a., Beta-N-acetylhexosaminidase (RefSeq) from Shewanella loihica PV-4

 Score =  649 bits (1674), Expect = 0.0
 Identities = 370/895 (41%), Positives = 520/895 (58%), Gaps = 83/895 (9%)

Query: 20  LNTTSPQEVVDTLANNLDVQYQVVNNHGADTGLACQTLEAEWASCNQVNMTLVNRGEAVN 79
           ++ +S Q+ +   A +L V Y  + N+       C +   +   C    + LV  G   +
Sbjct: 38  VSESSAQQALHQFATSLAVNYHTLTNYPQQ----CTSTGVD-GRCFAAQIELVP-GVDFD 91

Query: 80  SKDWAIYFHSIRLILDVGNDQFKITRVTGDLHKLEPTDKFDGFAAGETVTLPLIGEYWTL 139
            KDWAIY+  +R +  V  D F++T+V GDLH++ PT++F GF   + V +  +GE W L
Sbjct: 92  RKDWAIYYSQMRPVKQVLTDAFELTQVKGDLHRITPTERFSGFQKDQPVDIAFLGELWQL 151

Query: 140 FETDFMPRAFVTAPDAEPKVIAALNTEDVASFVSGLEGE-----------NLKRTPSDNN 188
            ETD MP  ++  P  +P++I++      AS  +G+E               KR+ +D  
Sbjct: 152 SETDAMPNYYIVVPGLKPELISSTQLTVDAS--TGMEQRPYVETYVSAESQYKRSDTDKL 209

Query: 189 VFAQALSRFEKNSDVALQD--VTHALIPTPLQ--VKSHSGSVSIAKGIALPSKAFDGEQM 244
            +A     F+ N D+  +     +A+IPTP +  V S S  +S+A G  L + +     +
Sbjct: 210 KWATPQVLFDANQDIESRPELAVNAIIPTPKRQIVTSQSPVLSLASGYHLDAGSVAKASV 269

Query: 245 QALNERAQLLGVNLKGVMPAQVIINPKSFKGDLAKSGAYRLAITDKAVKVTAFDQAGAFY 304
           +A   R   LGV      P  + +  +     LA+ G YRL IT   + + A D AG  Y
Sbjct: 270 EAALARLAHLGVKPS---PQGIPLKLEPSTTKLAEGG-YRLDITSDGITIGASDDAGFSY 325

Query: 305 AMQSLLGLVDMADATQLPKVEIVDAPRFDYRGVMVDVARNFHSKQAILATLDQMAAYKMN 364
            + SL  L+ + D   L  + I D PR+D+RG+ VDVARNFHSKQ IL  LDQMAAYK+N
Sbjct: 326 GLASLTSLISL-DTLSLNAMMIEDEPRYDFRGMHVDVARNFHSKQFILDLLDQMAAYKLN 384

Query: 365 KLHLHLTDDEGWRIEIPGLPELTDIGAQRCFDPSETECVLPQLGSGPNADNFGSGYFTKQ 424
           KLHLH+ DDEGWR+EI GLPELT +G++RC D  E  C+LPQLGSGP+ D+  +G+++K 
Sbjct: 385 KLHLHMADDEGWRLEIDGLPELTLVGSRRCHDLQEDTCLLPQLGSGPDGDSKVNGFYSKA 444

Query: 425 DYLEILQYAKARHIEVIPEIDMPAHARAAVVSMEARYQRLMQEGNEAAANEFRLLDPQDT 484
           DY+EIL+YA AR I+VIP +DMP H+RAA+ SMEARY+RLM EGNEAAANE+RL+DP D 
Sbjct: 445 DYIEILKYAGARQIQVIPSMDMPGHSRAAIKSMEARYRRLMAEGNEAAANEYRLIDPLDK 504

Query: 485 SNVTTVQFYDRMSFINPCLDSSKRFVDKVISEIAAMHQAAGMPLTTWHFGGDEAKNIKLG 544
           +   ++Q+YD  + +N C+DSS  FVDKV+SEI+ +HQAAG  L  +H G DE       
Sbjct: 505 TRYASIQYYDD-NTLNVCMDSSYHFVDKVVSEISKLHQAAGQSLELYHIGADETAG---- 559

Query: 545 AGFQDVNTQEPVSWKGNLDLSKQDKPFARSPQCQNLIA--TGAVSDFGHLPSYFAEQVSK 602
                       +W               SP CQ L+A     +    H  +YF E+V+ 
Sbjct: 560 ------------AW-------------VDSPVCQALLADKESGLDSEAHFGAYFIERVAN 594

Query: 603 LVAEKGIPNFQAWQDGLKYSEGEKAFATENTRVNFWDVLYWGGSASAYEWAEKGYDVIIS 662
           ++A+KGI     W DG+ ++  E+  A  N + N WDV+  GG   A+  A  G+D ++S
Sbjct: 595 MLADKGIET-AGWSDGMSHTRPERMPA--NNQTNIWDVVAHGGYQRAHAQANLGWDTVLS 651

Query: 663 NPDYVYMDMPYEADPKERGYYWATRATDTRKMFGFAPENLPQNAETSLDRDGNGFSGKGE 722
           NP+ +Y D PYEADPKE GYYWA+R+T+ RK+F F P+NLP NAE   D +G  F     
Sbjct: 652 NPEVLYFDFPYEADPKEHGYYWASRSTNERKLFSFMPDNLPANAEQWTDIEGKPFEADDT 711

Query: 723 VK--------------GKPFYGLSAQLWSETVRTDEQYEYMVFPRVLAAAERAWHRAEWE 768
           +K              G  F G+  QLWSET+R+D+  EYMVFPR+L  AERAWH+A+WE
Sbjct: 712 LKLDDAGKRLSGPLNQGVRFKGIQGQLWSETIRSDQVVEYMVFPRLLVLAERAWHKADWE 771

Query: 769 NAYKV-GVEYSQETQLVN---HKALNADWNRFANVLGQRELAKLEKAGIDYRLPVPGAKI 824
             Y+  G +YS ET        +     W  FAN LG +ELAKL++AGI YR+P  GAKI
Sbjct: 772 VPYQYQGAKYSPETNYFTAEMREKQRVQWQTFANTLGYKELAKLDRAGIAYRVPTLGAKI 831

Query: 825 ENGHLAMNVQFPGVTLQYSLDGQTWLDYDAKQAPKVSGEVWIRSVSASGERTSRV 879
           ++G+L +N  +PG+ ++Y +DG  W  Y   +A  VSG V +R V+A G R  R+
Sbjct: 832 KDGYLQVNSIYPGLGIEYRVDGGQWQQY--TEAVSVSGRVEVRGVAADGIRKGRI 884