Pairwise Alignments

Query, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) from Pseudomonas fluorescens FW300-N2E2

 Score =  337 bits (863), Expect = 2e-96
 Identities = 252/792 (31%), Positives = 402/792 (50%), Gaps = 42/792 (5%)

Query: 119 AEQVKALVAEVGYQ-AIEAEQESTFAPAASIDEKET-DTPDAENSSNTEATEASSQTLSL 176
           AE + A   E  YQ   EA       P    DE    D PD + S      E +  TL  
Sbjct: 40  AEAIVAGGLESYYQHRSEASANPESLPVQLTDELTLYDRPDVQQSFVRREGELAETTL-- 97

Query: 177 LIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANP--QPLLNAIQSSGYQ 234
           L++G++CA+C   +EK L S+  V  A++NL+     VR   A      LL  ++  GY 
Sbjct: 98  LMEGISCAACGWLIEKQLRSLPAVVEARLNLSNHRLHVRWADAQLPLSTLLTELRQIGYV 157

Query: 235 AEILD-DPAQQQAKQQAQLEALQKEHKQSALLGIALGTPLMLWGVFGGNMMIRNSSDQMV 293
           A     D A +Q   Q +L AL++      L   A+   +  W  F  N+ +      ++
Sbjct: 158 AHPYQADQACEQLAAQNRL-ALRQLGVAGLLWFQAMMATMATWPEF--NIDLSPEMHTIL 214

Query: 294 WGGIGTICFALLLTAGRHFFMNAWQALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFP 353
                 +   ++  +   FF  A + L     TMD  V+L  G+A+      VA   T  
Sbjct: 215 RWVALFLTTPIVFYSCAPFFKGAMRDLRTRHLTMDVSVSLAIGSAY------VAGIWTSI 268

Query: 354 DAARHVYFEATAMIIGLISLGHYIETKAKSNTNRSLQALLNLQPQQATLVTEQGD-QSIA 412
                +YF+A  M    +  G Y+E +A+  T  +   L+NL P     + + G  + I 
Sbjct: 269 TGVGELYFDAVGMFALFLLAGRYLERRARERTAAATAQLVNLLPASCLRLEDNGQSERIL 328

Query: 413 VADIQLGMSLRIKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDG 472
           +++++ G  + + PG  +P DG +  G S +DES+LTGE +P  ++ G  V AGTLN +G
Sbjct: 329 LSELRTGDRVLVHPGAVLPADGRILDGQSSIDESLLTGEYLPQPRQVGDAVTAGTLNVEG 388

Query: 473 SLVITATGIGAQTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYL 532
           +L +    +G  T L+ I++++ +AQ+ KP +A +AD+ +  F+   ++ A     +W+ 
Sbjct: 389 ALTVEVLALGQDTRLSAIVRLLERAQAEKPRLAEIADRAAQWFLLFSLIAAAAIGLVWWQ 448

Query: 533 YGPDPKASYMLVVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQTASQV 592
              D   ++ +V+A  +L+  CPCAL LATP ++T   G   ++G+L+   +VL+  +Q+
Sbjct: 449 L--DASRAFWIVLA--MLVATCPCALSLATPTALTAATGTLHKLGLLLTRGHVLEGLNQI 504

Query: 593 DTVVFDKTGTLTLGKPSIQSLHVLQG-DENQLLALAYALEQQSEHPLAKAICDYAKQRNI 651
           DTV+FDKTGTLT G+ +++++  L   D +Q L LA ALE +SEHP+A+A          
Sbjct: 505 DTVIFDKTGTLTEGRLALRAIRPLAALDSDQCLGLAAALENRSEHPIARAF-------GR 557

Query: 652 SPVEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQGIDLSMAESTLEKFAAQAWTPVAV 711
           +P+   Q  +  G GL      Q + +G   F+ E    LS A+          W  +  
Sbjct: 558 APLAAEQVQSTPGLGLEGLVTEQRLRIGQPGFVCE----LSGADVPQMPDEPGQWLLLGD 613

Query: 712 AYRGMLQGVLAIADPIKPTSAQAVRKLNELGIHTVMLTGDHTSVANAIAKELGISQVIAQ 771
               +   VL   D ++  +   +      G  T++L+GD + +  ++A ELGI +    
Sbjct: 614 EIGPLAWFVLD--DRLRVDAPALLAACKARGWRTLLLSGDSSPMVASVAAELGIDEARGG 671

Query: 772 VLPDQKAQHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGSGSDVAIESAQMTLLNS 831
           + PD K   +Q L QQGRKV M+GDG+ND P LA ADI +AMGS +D+A  SA   LL++
Sbjct: 672 LRPDDKLAVLQQLHQQGRKVLMLGDGVNDVPVLAAADISVAMGSATDLAKTSADAVLLSN 731

Query: 832 SPTSVVSAIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAFGFLLSPVVAGAAMAL 891
              +++ A  L++ T R + +NL  A +YN L +P A      A G+ ++PV A   M++
Sbjct: 732 RLDALIHAFSLARRTRRVIIENLVWAGLYNGLMLPFA------ALGW-ITPVWAAVGMSI 784

Query: 892 SSITVVSNANRL 903
           SS+TVV NA RL
Sbjct: 785 SSLTVVLNALRL 796



 Score = 27.3 bits (59), Expect = 0.004
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 15  LALRGLNCMGCARKLERQLNQDLTVEIETLTPTSIELH-----THATLNEVLTSIESLGY 69
           L + G++C  C   +E+QL     V    L  ++  LH         L+ +LT +  +GY
Sbjct: 97  LLMEGISCAACGWLIEKQLRSLPAVVEARLNLSNHRLHVRWADAQLPLSTLLTELRQIGY 156