Pairwise Alignments

Query, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., Heavy metal translocating P-type ATPase from Synechococcus elongatus PCC 7942

 Score =  417 bits (1072), Expect = e-120
 Identities = 282/787 (35%), Positives = 419/787 (53%), Gaps = 63/787 (8%)

Query: 166 ATEASSQTLSLLIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALV---RGIFANPQ 222
           + + SS ++ + ++GM CA CVA+VE+ L    GV++  VNL  + A V     +  +P 
Sbjct: 8   SADPSSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKVDYDAALIEDPT 67

Query: 223 PLLNAIQSSGYQAEILDDPAQQQAKQQAQLEALQKEHKQSALLGIALGTPLMLWGVFGGN 282
            L   I   G++A++  D         A++  LQ++  Q A+    L   +  WG  G  
Sbjct: 68  VLTTEITGLGFRAQLRQDD-NPLTLPIAEIPPLQQQRLQLAIAAFLL--IVSSWGHLGHW 124

Query: 283 MMIRNSSDQMVWGGIGTICFALLLTAGRHFFMNAWQALTHGRATMDTLVALGTGAAWFYS 342
           +         +W       +ALL   GR      WQ L  G   M++LV LGTG+A+  S
Sbjct: 125 LDHPLPGTDQLWFHALLATWALL-GPGRSILQAGWQGLRCGAPNMNSLVLLGTGSAYLAS 183

Query: 343 MLVVAWPQTFPDAARHVYFEATAMIIGLISLGHYIETKAKSNTNRSLQALLNLQPQQATL 402
           ++ + WPQ         +F+   M++G I LG  +E +A+  +  +LQ LL LQP+   L
Sbjct: 184 LVALLWPQL----GWVCFFDEPVMLLGFILLGRTLEEQARFRSQAALQNLLALQPETTQL 239

Query: 403 VT-----------EQGDQSIAVADIQLGMSLRIKPGEQVPVDGVVSTGHSYLDESMLTGE 451
           +T           E   Q   VA ++ G  +++ PG+++PVDG +  G S LD +MLTGE
Sbjct: 240 LTAPSSIAPQDLLEAPAQIWPVAQLRAGDYVQVLPGDRIPVDGCIVAGQSTLDTAMLTGE 299

Query: 452 PIPVLKEAGAKVAAGTLNQDGSLVITATGIGAQTMLARIIQMVRQAQSSKPAMARLADQI 511
           P+P   + G +V AGTLN    LVI A   G+QT LA I++ V +AQ  K  + R AD I
Sbjct: 300 PLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKAPVQRFADAI 359

Query: 512 SSVFVPVVVVIAILSAALWYLYG----------------------------PDPKASYM- 542
           +  FV  V  IA L+   W   G                            P   +  + 
Sbjct: 360 AGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAHPHSHSPLLL 419

Query: 543 -LVVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQTASQVDTVVFDKTG 601
            L +A +VL++ACPCALGLATP +I V  G AAE GIL+R  +VL+  +++   VFDKTG
Sbjct: 420 ALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDVLEQLARIKHFVFDKTG 479

Query: 602 TLTLGKPSIQSLHVLQG-DENQLLALAYALEQQSEHPLAKAICDYAKQRNISPVEISQFT 660
           TLT G+  +  +  L   D ++LL  A ALE  S HPLA A+   A+  N++P+  S   
Sbjct: 480 TLTQGQFELIEIQPLADVDPDRLLQWAAALEADSRHPLATALQTAAQAANLAPIAASDRQ 539

Query: 661 NQRGRGLLADYQNQTVLVGSLAFMQEQGIDLSMAESTLEKFAAQAWTPVAVAYRGMLQGV 720
              G G+      +++ +G+  ++Q       +A + L   +A A T + +A    L   
Sbjct: 540 QVPGLGVSGTCDGRSLRLGNPTWVQ-------VATAKLPTGSAAA-TSIWLADDQQLLAC 591

Query: 721 LAIADPIKPTSAQAVRKLNELGIHTVMLTGDHTSVANAIAKELGISQ--VIAQVLPDQKA 778
             + D  +P +A+ V+ L   G    +L+GD  + A A+A++LG+    V+A+VLP+ KA
Sbjct: 592 FWLQDQPRPEAAEVVQALRSRGATVQILSGDRQTTAVALAQQLGLESETVVAEVLPEDKA 651

Query: 779 QHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGSGSDVAIESAQMTLLNSSPTSVVS 838
             I ALQ QG  VAMIGDGINDAPALA A +GI++ +GSD+A +SA + L      SV+ 
Sbjct: 652 AAIAALQSQGDAVAMIGDGINDAPALATAAVGISLAAGSDIAQDSAGLLLSRDRLDSVLV 711

Query: 839 AIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAFGFLLSPVVAGAAMALSSITVVS 898
           A  LS+  LR ++QNL  A  YN + +P+AAG   PA+G  L+P +AGA MA+SS+ VVS
Sbjct: 712 AWNLSQMGLRTIRQNLTWALGYNVVMLPLAAGAFLPAYGLALTPAIAGACMAVSSLAVVS 771

Query: 899 NANRLRW 905
           N+  LR+
Sbjct: 772 NSLLLRY 778



 Score = 26.2 bits (56), Expect = 0.009
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 17 LRGLNCMGCARKLERQLNQDLTVE 40
          + G+ C GC   +ER+L Q   VE
Sbjct: 20 VEGMKCAGCVAAVERRLQQTAGVE 43