Pairwise Alignments

Query, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., cation transport ATPase, E1-E2 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  320 bits (820), Expect = 2e-91
 Identities = 244/796 (30%), Positives = 386/796 (48%), Gaps = 55/796 (6%)

Query: 125 LVAEVGYQAIEAEQESTFAPAASIDEKETDTPDAENSSNTEATEASSQTLSLLIKGMTCA 184
           L++   ++     +++   P A       D P+ +   +   +E +S ++SL I G+TCA
Sbjct: 47  LLSYYKFRTEPGNKQTALVPEALNQFSAYDLPEVQQ--DFVHSEDNSDSVSLSIDGITCA 104

Query: 185 SCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQ--PLLNAIQSSGYQAEILDDPA 242
           +C   +E  +  + GV+   VN T Q A++       +   +L  I   GYQA      A
Sbjct: 105 ACAWLIEHKVKQLSGVRQVMVNSTTQRAMISWDKQQVKLSDILGQISRIGYQA------A 158

Query: 243 QQQAKQQAQLEALQKEHKQSALLGIA-------LGTPLMLWGVFGGNMMIRNSSDQMVWG 295
             Q  +Q +L   Q   K    LG+A       +   L L+  +  ++ ++   D   W 
Sbjct: 159 PYQVDEQ-ELTTKQNSRKFLLRLGLAGFATMQVMMFALALYTGYFTDLDVQYR-DYFRWV 216

Query: 296 GIGTICFALLLTAGRHFFMNAWQALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFPDA 355
            +      ++L + + F+ +A + L  G+  MD  V++  G A+  S           + 
Sbjct: 217 SM-IFATPVVLYSAQPFYFSAIRTLLSGKLNMDVSVSIAIGGAFTASCFATV------NG 269

Query: 356 ARHVYFEATAMIIGLISLGHYIETKAKSNTNRSLQALLNLQPQQATLVTEQGDQSIAVAD 415
              VYFE+ +M    + LG Y E KA+   + S   L  L P  A LV EQG + I    
Sbjct: 270 TGEVYFESVSMFTFFLLLGRYFEQKARQKASVSSSNLHKLVPLTAHLVNEQGQEEIPAKK 329

Query: 416 IQLGMSLRIKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGSLV 475
           ++LG  + +KPGE V  DG V  GHS ++E+MLTGE +P+ K   ++V AGT+N +  + 
Sbjct: 330 LRLGDIILVKPGEMVAADGCVVEGHSSINEAMLTGEQMPIDKPVDSQVFAGTINLEQPIK 389

Query: 476 ITATGIGAQTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYLYGP 535
           +  T +G   ++A II++   A ++KPA+A LAD++S  F   ++ IA ++  +W    P
Sbjct: 390 VKVTALGQDQLVAEIIRLQELASNTKPAVAMLADKLSRYFSGTILTIATITYFVWLQISP 449

Query: 536 DPKASYMLVVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQTASQVDTV 595
           +        V  +VL+  CPCAL LATP ++T        +GI+ R A V +   Q+  V
Sbjct: 450 ED----AFWVTLSVLVATCPCALALATPTAVTCATAIFTRLGIITRKAGVFEKLPQIKHV 505

Query: 596 VFDKTGTLTLGKPSIQSL--HVLQGDENQLLALAYALEQQSEHPLAKAICDYAKQRNISP 653
           +FDKTGTLT G  S+  +  H     E ++LA+A ALE  S HP+A A   Y     ++P
Sbjct: 506 IFDKTGTLTCGTLSVSEVKCHSHLAIE-EVLAIAAALETGSLHPIATAFAAY-----LTP 559

Query: 654 -VEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQGIDLSMAESTLEKFAAQAWTPVAVA 712
            V  +Q  ++ G G+          +G+  F        + A    E    Q W      
Sbjct: 560 DVVANQVHHEVGFGVKGLINGTEYRIGNAQF--------TGALVNPEFINQQIWLAWGND 611

Query: 713 YRGMLQGVLAIADPIKPTSAQAVRKLNELGIHTVMLTGDHTSVANAIAKELGISQVIAQV 772
               +   + I D I+  S + V  L + G    + +GD +   + +AK LGI+ V + +
Sbjct: 612 DSLEVLATIEIKDNIRVDSKETVGILKQQGCRVSIASGDSSGHVHQLAKALGITDVHSGL 671

Query: 773 LPDQKAQHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGSGSDVAIESAQMTLLNSS 832
            P  K   ++ L QQ   V M GDGINDAP LA AD+ +AMGSGS +A  SA + LL   
Sbjct: 672 TPADKLALVKKL-QQSNPVVMFGDGINDAPVLAGADLSVAMGSGSAIAKNSADLILLGDH 730

Query: 833 PTSVVSAIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAFGFLLSPVVAGAAMALS 892
            +    A+ ++K T + ++QNL  A  YN L +P+A           ++P +A   M+ S
Sbjct: 731 LSRFTQAVRVAKLTTQIIRQNLAWALGYNALILPLAV-------TGHVAPYIAAIGMSAS 783

Query: 893 SITVVSNANRLRWSKI 908
           S+ VV N+ RL   KI
Sbjct: 784 SLIVVGNSLRLLRIKI 799