Pairwise Alignments

Query, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

Subject, 753 a.a., cation transport ATPase, E1-E2 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  704 bits (1817), Expect = 0.0
 Identities = 373/752 (49%), Positives = 506/752 (67%), Gaps = 19/752 (2%)

Query: 174 LSLLIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAIQSSGY 233
           + L +  M CA CVA +EKA  +   V SA++NL ++   V G  + P   L  +  +G+
Sbjct: 4   IKLYVANMNCAGCVAKIEKAFAAESNV-SARINLADKQVTVDGKIS-PDAALAVMDKAGF 61

Query: 234 QAEILDDPAQQQAKQQAQLEALQKEHKQSALLGIALGTPLMLWGVFGGNMMIRNSSDQMV 293
            A+++ D      +++ +  A  K   + A+  +A+G P+MLWG+ GG MMI + S Q+ 
Sbjct: 62  PAQLIVDAKAAAEEKRIEDAAEYKLRMRQAVAALAVGIPMMLWGLLGGEMMINSPSMQLG 121

Query: 294 WGGIGTICFALLLTAGRHFFMNAWQALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFP 353
           WG +G I  ALL+  GRHF+   W+AL      MDTL+ LGT  AW YSM++V  P  FP
Sbjct: 122 WGIMGLITLALLIGTGRHFYQGMWRALKAKTTNMDTLIVLGTSTAWLYSMVMVLIPSAFP 181

Query: 354 DAARHVYFEATAMIIGLISLGHYIETKAKSNTNRSLQALLNLQPQQATLVTEQGDQSIAV 413
              RHVYFEA+ MI+GLI+LGH +E KA+  T+ ++Q LL LQ  +A  + E GD+ + +
Sbjct: 182 MDTRHVYFEASVMILGLINLGHALELKARGKTSEAVQRLLGLQSSRAIRIGENGDEEVEI 241

Query: 414 ADIQLGMSLRIKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGS 473
           + ++LG  LR++PG++V +DGVV +G S LDE+MLTGEPIPV K+ G  ++AGT+N +GS
Sbjct: 242 SQLKLGDKLRLRPGDRVALDGVVESGQSLLDEAMLTGEPIPVPKQVGDSLSAGTVNGNGS 301

Query: 474 LVITATGIGAQTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYLY 533
           LV   +     T LA+II +V++AQ+SK  + RLAD IS+VFVP VVVIA+L+AA+WYL 
Sbjct: 302 LVYRVSAGQRDTRLAKIIALVQEAQTSKMPIGRLADNISAVFVPTVVVIALLAAAIWYLV 361

Query: 534 GPDPKASYMLVVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQTASQVD 593
           GP+P  S+ LVV T+VLIIACPCALGLATP+SI V +G+AA+MG+L+++   LQ+AS+VD
Sbjct: 362 GPEPALSHALVVLTSVLIIACPCALGLATPMSIMVSVGRAAQMGVLVKNGEALQSASKVD 421

Query: 594 TVVFDKTGTLTLGKPSIQSLH--------VLQGDENQLLALAYALEQQSEHPLAKAICDY 645
            VV DKTGT+T GKP +  +H        +   D++ LL    +LEQ SEHPLA AI  Y
Sbjct: 422 CVVLDKTGTVTQGKPEVTDIHWHGEYEQALSADDKSALLGAIASLEQHSEHPLANAIVSY 481

Query: 646 AKQRNISPVEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQGID----LSMAESTLE-- 699
            KQ +I       FTN +G+G+         LVG+ A M    +     L+ +  T E  
Sbjct: 482 VKQASIPLPATEIFTNHQGKGIEGRVNYTDYLVGNQALMTAFKVPPLTVLANSNETSELD 541

Query: 700 ---KFAAQAWTPVAVAYRGMLQGVLAIADPIKPTSAQAVRKLNELGIHTVMLTGDHTSVA 756
               FA Q  TP+ VA  G L   +AIADPIK  + +A+  +   GI  V+LTGD+   A
Sbjct: 542 ATAHFAKQGKTPIYVAEAGKLVATIAIADPIKADAKEAISAIRSQGIRVVLLTGDNPQTA 601

Query: 757 NAIAKELGISQVIAQVLPDQKAQHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGSG 816
            A+A+++GI +VIA VLP+QK QHI+ALQQQG  VAM+GDGINDAPAL  AD+GIAMGSG
Sbjct: 602 QAVAEQVGIEEVIAGVLPEQKQQHIKALQQQGHVVAMVGDGINDAPALMSADVGIAMGSG 661

Query: 817 SDVAIESAQMTLLNSSPTSVVSAIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAF 876
           ++VAIESA MTLL+     + +   LS+AT+ N+KQNLFGAFIYN++GIP+AAGVLYP  
Sbjct: 662 TEVAIESADMTLLSHQLIVIANLFALSRATMTNIKQNLFGAFIYNSIGIPVAAGVLYPLT 721

Query: 877 GFLLSPVVAGAAMALSSITVVSNANRLRWSKI 908
           G LLSPV+AGAAMALSS+TVV+NANRLR  K+
Sbjct: 722 GMLLSPVIAGAAMALSSLTVVTNANRLRQQKL 753