Pairwise Alignments

Query, 474 a.a., glutamate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., glutamyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  339 bits (870), Expect = 1e-97
 Identities = 186/464 (40%), Positives = 268/464 (57%), Gaps = 7/464 (1%)

Query: 3   VKTRFAPSPTGYLHVGGARTALYSWLYAKSQGGEFVLRIEDTDLERSTQAAVDAIIEGMT 62
           V TRFAPSPTGYLH+GGARTAL++WLYA+ +GG+F+LRIEDTD  RST  A +AI  G+ 
Sbjct: 9   VVTRFAPSPTGYLHIGGARTALFNWLYARGRGGKFLLRIEDTDKARSTAEATEAIFAGLR 68

Query: 63  WLGLEWDEGPYYQTKRFDRYNQVIDQLLAEGKAYKCYAPKELLDEIRAEQEANKEMPRYD 122
           WLGL+WD     Q +   R+ QV   L   GKAYKC+  +   DEI A +EA +   R  
Sbjct: 69  WLGLDWDGDAVSQAEGAARHAQVARALQEAGKAYKCFTTQ---DEIAAFREAARAEGRST 125

Query: 123 ANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRGRIEIRNDQLDDLIIRRTDGTP 182
                 +  + A+    P  IR + P+EG+ V  DQ++G + IRNDQLDD+I+ R+DG+P
Sbjct: 126 LFRSPWRDADPASHPDAPYVIRIKAPQEGTTVIADQVQGDVRIRNDQLDDMILLRSDGSP 185

Query: 183 TYNFCVVVDDVDMGISHVIRGEDHINNTPRQINIYKAMGATIPTFAHCAMILGDDGAKLS 242
            Y   VVVDD DMG++HVIRG+DH+NN  RQ+ IY AMG  +P FAH  +I G DG KLS
Sbjct: 186 VYMLAVVVDDHDMGVTHVIRGDDHLNNAARQMMIYDAMGWDMPVFAHIPLIHGPDGKKLS 245

Query: 243 KRHGAVSVMQYRDDGYLPEALLNYLVRLGWGHGDQEIFSRDEMINLFSLNAISKSASAFN 302
           KRHGA+ V +Y+  GY  +A+ NYL RLGW HGD E F   +    F L+ I KS +  +
Sbjct: 246 KRHGALGVEEYQAMGYPAQAMRNYLARLGWSHGDDEFFGDAQAQAWFDLDGIGKSPARLD 305

Query: 303 TDKLLWLNNHYIKTSEPEYVAKHLEWHFENQG---INKATGPALAEVVKLVGERCNTLVE 359
             KL  L+  ++     E +    + +    G   + +A    L+  +  + +R     +
Sbjct: 306 LKKLDNLSGQHLGVMADEAIVAGAQGYLAATGAPPLTEAQETGLSRAMYCLKDRAKKFPD 365

Query: 360 LAQQSRYFYEDFAEFDADAAKKHLRGVAKEPLMLALSKIEALTEWNTEALHHVIAQVCEE 419
           L +++ +            A K L  V++  L     +++    W  + L  V+  + E 
Sbjct: 366 LLEKAHFILASRPIDPDPKAAKSLDTVSRGILAELTPQLQN-ASWTRDTLEGVVGGLAEA 424

Query: 420 LEIGMGKIGMPLRVAVTGGGQSPSVDAVMNLIGQERVIARIKMA 463
             +G+GK+  PLR A+ G   +PSV  +M ++G++  +AR+  A
Sbjct: 425 HGLGLGKLAAPLRAALAGRSATPSVFDMMLVLGRDETLARLSDA 468