Pairwise Alignments

Query, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., cell envelope biogenesis protein OmpA from Pseudomonas fluorescens FW300-N2E3

 Score =  102 bits (255), Expect = 7e-27
 Identities = 52/110 (47%), Positives = 73/110 (66%), Gaps = 3/110 (2%)

Query: 211 TFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAK 270
           TF T SA + P+  Q L+ + G L ++ Q ++E+VG+TDSTGS  +N  LS+RRAQ+VA 
Sbjct: 121 TFGTDSANIAPSFYQPLNNLAGSLKEFNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVAT 180

Query: 271 ALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVEL---VIPEFQY 317
            L +QG+  + +SA+G G  +PIASN    GR +NRRVE+    IP  QY
Sbjct: 181 YLTSQGVSGANLSARGAGPDNPIASNGDVNGRAQNRRVEVNLKAIPGQQY 230