Pairwise Alignments

Query, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Outer membrane protein A from Enterobacter sp. TBS_079

 Score =  156 bits (395), Expect = 6e-43
 Identities = 119/347 (34%), Positives = 174/347 (50%), Gaps = 38/347 (10%)

Query: 1   MKKLAAIISATLL-FASSAAVAEV----YVGGKVGKSWLDDACLAGQSCEDDDQV----- 50
           MKK A  I+  L  FA+ A  A      Y GGK+G S   D      S  +D        
Sbjct: 1   MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLGWSQFHDTGWYNSSLNNDGPTHESQL 60

Query: 51  -VGAFLGYQANKWLSLEAGYDYLGKFTAAGLNDE---KVQAVTLAPKLSIPLTEGIALYG 106
             GAF GYQ N ++  E GYD+LG+    G N     K Q V L  KL  P+T+ + +Y 
Sbjct: 61  GAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYT 120

Query: 107 KVGGAYVDYGSK-----DDY----SYLGAAGLEFNTNHNVTMRLEYQ---NLTDINNDIV 154
           ++GG      S      DD+    S + A G+E+    ++  RLEYQ   N+ D N   V
Sbjct: 121 RLGGMVWRADSSNSIAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWVNNIGDGNTVGV 180

Query: 155 RARAETATLGIAYKFGGSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFAT 214
           R      ++G++Y+FG  E+ AP+V      PAP  AP  +   TK FT +      F  
Sbjct: 181 RPDNGMLSVGVSYRFGQQEDAAPIVA-----PAPAPAPEVQ---TKHFTLK--SDVLFNF 230

Query: 215 ASAELKPATVQKLDKIVGYLNQYP--QAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKAL 272
             A LKP   Q LD++   L+        V V+G TD  GS+AYNQKLSE+RAQ+V   L
Sbjct: 231 NKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSEKRAQSVVDYL 290

Query: 273 EAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVIPEFQYQV 319
            ++GI A++IS +G+GE++P+  N     + +   ++ + P+ + ++
Sbjct: 291 ISKGIPANKISPRGMGEANPVTGNTCDNVKARAALIDCLAPDRRVEI 337