Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 119 VGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGA 178
           +G +  + G S  +++  D   L +  +   P  ++D+ QVE+  GPQ  + GRNT+AG 
Sbjct: 132 LGNIDFYLGASQPVSIIQDDVVLEHVVLKSNP--VYDVDQVEVLRGPQGTLFGRNTTAGI 189

Query: 179 IVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAA 238
           +   +  P   +   V A  G  +     G    P I D L+FR+S   Q RD +VD   
Sbjct: 190 VKFDTVKPGDTYTGRVNASYGSYNTISLDGGFGGP-INDVLSFRVSALYQHRDDWVDNTF 248

Query: 239 FEPAGD----PKKIEM-----NSVRGKLLYEPS 262
              + D    P+K  M      + R +LL +PS
Sbjct: 249 AGSSADGTRTPRKDAMGGYNDRNARLQLLLKPS 281



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 55/264 (20%)

Query: 466 KGYNASGAGLAFNSMQFTGFRPYEFEQESIWNYEFYTRHR-FSHSVEVLTNLFYNDFDSM 524
           +G    G    FNS   T       + E+I ++E   +   F + + +  + F    D +
Sbjct: 538 RGPTIQGRSAVFNSDFTTA------DSETILSWEAGIKSSLFDNRLRLNVSGFTYTVDDI 591

Query: 525 QMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSLELFANLGLLKTE------------ 572
           Q+    + G+  + N D+A  YG E    W   S+L L A L LL +E            
Sbjct: 592 QLNGNDADGNGVLFNADKAKAYGLEADLDWRPISNLSLTAGLSLLHSEIQDKRVYAQACA 651

Query: 573 --------------------FKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYT 612
                               F +  GN   LP APK + N+   YD   G   +  A + 
Sbjct: 652 LNGVVVCTVNDPTIRVGANTFAQIDGN--PLPNAPKYNLNLAARYDIPVG---NDGAFFV 706

Query: 613 GSYFSESG-------NSEKFAIDSYWVANAQLAYVFEHG--RATLYATNLLDSDKTTLYL 663
            + +++ G       +S +F  D  +    +L Y   +G      +A N+ +       +
Sbjct: 707 STDWNKQGETSFVLYDSTEFRADGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNVKGVI 766

Query: 664 STNNTLDQLKQQPRMIGASVQLNF 687
              N +  +  +PR++G SV +N+
Sbjct: 767 --ENYMAAVYNEPRIVGVSVNVNW 788