Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., TonB-dependent receptor domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.2 bits (160), Expect = 5e-15
 Identities = 145/629 (23%), Positives = 245/629 (38%), Gaps = 70/629 (11%)

Query: 52  LVVIGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRG 111
           LVVIG +    +   +A+V V   + I  + GAT +  LL+        GQS     I+ 
Sbjct: 31  LVVIGRQADTPL-NIAANVAVITAEDIALS-GATSLAGLLR--------GQS----AIQI 76

Query: 112 ID-GSGPSVGGLASFAGTSPRLNMS-IDGRSLTYSEIA---FGPRSLWDMQQVEIYLGPQ 166
            D G+GP +      AG +    +  +DGR L   +IA       SL  ++++E+  G  
Sbjct: 77  SDSGTGPVLAMRGFSAGQAANNTLVLVDGRRLNNIDIAAPSLNAVSLSQIERIEVLSGSA 136

Query: 167 SYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFD 226
             + G     G I + +     +   A   G G      TA  +SA + +    F +  +
Sbjct: 137 GVLYGDQAVGGVINIITRRSQENTGGASLTG-GSFGTLGTAMDVSAALNERWNLF-VGGN 194

Query: 227 QQKRDSFVDLAAFEPAGDPKKIEMNSVRGKLLYEPSALDGFKT---TLTLSHMDSRGPQT 283
             K D++ D A  E      +IE      +   E S  D  +    +LT   + +   Q 
Sbjct: 195 FDKSDNYRDHAVSESGSVLGRIEYRGDGQRFFAEASYYDDDRELAGSLTAEELAANPRQA 254

Query: 284 ENINVAG-----NEAFRPVYETASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNS 338
              N +       +A R  YE  S T  W +    +   T  N + +             
Sbjct: 255 NAANSSDYQHNLTKAGRLGYEH-SLTEHWTLAADFDASDTQVNYISWG------------ 301

Query: 339 RGDFNTDGKEFHIEP--LLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKA 396
            G   T+ +   + P  + RY    G +  + G    +   +       SAY   G T+ 
Sbjct: 302 -GAGETERQLISLTPKAIGRYQTEAGELKLVTGVDLSRGESE-----FTSAYMERGNTQE 355

Query: 397 K-SVFAEVTYALTPSINVNLAGRFE--REQVKRNVSHPRY-KLDYDETSSVFLPKLDVAY 452
             + FA+ +  LT S++  + GR+   +++++   + P   KLD D  +     +L + Y
Sbjct: 356 HWAAFAQASVPLTKSLSYVVGGRYAEVQDEIRDQSTFPLGGKLDNDAHAL----ELGLNY 411

Query: 453 TPVQGQTYGIKAAKGYNASGAGLAFNSMQFTGFRPYEFEQ-ESIWNYEFYTRH-RFSHSV 510
            PVQG  + ++A   +  +       + Q    RP      E+ W+Y+   +  R S   
Sbjct: 412 RPVQGHRFYLRAEDNFRFAKVDEQAYTSQ-ASLRPQTGRSYEAGWDYQGAQQALRLS--- 467

Query: 511 EVLTNLFYNDFDSMQMTQTTSSGDVFIA---NLDEASTYGAEIGSRWYATSSLELFANLG 567
             L  L   D      +  T  G  F     N DE+  YGA +   W    ++ L  +  
Sbjct: 468 --LYRLSLEDEIVFDPSADTPVGGYFPGANINADESRRYGAMLDWDWQLNDTISLGIDYQ 525

Query: 568 LLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEK-FA 626
               EF     + K L    + S  + +   F + +    +AAYTG  F E  N+     
Sbjct: 526 YTDAEFTAGLNDGKALSWVAEHSGRMYVSAQFAEYWSAYVDAAYTGERFVEGDNANMGEQ 585

Query: 627 IDSYWVANAQLAYVFEHGRATLYATNLLD 655
           +D++W+ NA +++  +   ATL   NL D
Sbjct: 586 MDAFWLTNAAVSFRKDALIATLRLDNLFD 614