Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 75.9 bits (185), Expect = 6e-18
 Identities = 145/660 (21%), Positives = 258/660 (39%), Gaps = 51/660 (7%)

Query: 24  AMMMGL-FTGSF-AYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIERT 81
           A+++G    GSF A AE+  T     E   + VIG +T+ +    +A+V V D   IE +
Sbjct: 9   ALLLGACLAGSFPALAESSGTPGPVDE--TITVIG-RTENTPINIAANVNVIDAAAIELS 65

Query: 82  PGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLN--MSIDGR 139
            GAT + +LL+        GQS     I+  D +  +V  +  F+ +    N  + IDGR
Sbjct: 66  -GATNLTELLR--------GQSG----IQVSDSNSGAVFAMRGFSASQAVNNTLILIDGR 112

Query: 140 SLTYSEIAFGPRS---LWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESA-VK 195
            L   +IA    S   L  ++++EI  G    + G     G I + +  P  +  S  + 
Sbjct: 113 RLNNIDIAAPSISAIGLNQVERIEILSGSAGVLYGDQAVGGVINIITKAPKDNGGSLQLS 172

Query: 196 AGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFEPAGDPKKIEMNSVRG 255
            G  ++  ++  G ++   I D      + +  K D++ D  A + +    +++ +    
Sbjct: 173 GGSFDTFEAKAEGSVA---INDNWRLYGAANHLKSDNYRDHNASKTSSVLGRLQYDDEVQ 229

Query: 256 KLLYEPSALDGFKTTLTLSHMDSRGPQTENI-NVAGNEAFRPVYETASFTTA-WDIIWHL 313
           + L E S  D  +      + D        + ++   + F   Y     T A       L
Sbjct: 230 QFLAEASHYDNHRELAAALNDDQLKQNPRQMGDLKQGDLFIDAYLHEMTTAARTGYQRQL 289

Query: 314 NDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIALDGSVNTLIGARYY 373
           N+ +    +L Y+D      +  N+         EF  + +       G +  + G    
Sbjct: 290 NEAWALGADLNYSDTLTTGLSTWNTSRRDTRSLLEFKPKAVANIKTDIGELKLVTGL--- 346

Query: 374 QSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFER--EQVKRNVSHP 431
                D+    A+        K  S + + T  LT S +  + GR+    +++    ++P
Sbjct: 347 -----DLSRGEATFSNRSNVQKLASAYLQATVPLTESFSYVVGGRYAEVTDELVDASAYP 401

Query: 432 RYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYN-ASGAGLAFNSMQFTGFRPYEF 490
              +D D+ +  F  +L + Y P Q   + ++A   +  A     A+      G +P   
Sbjct: 402 N-GIDLDQDAHAF--ELGLNYRPSQQHRFYLRADDNFRFAKVDEQAYTPESIQGLKPQTG 458

Query: 491 EQ-ESIWNY--EFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANLDEASTYG 547
              E+ W+   E  T    ++ +++   +    FD    T    S      N D +  YG
Sbjct: 459 RSYEAGWDLLLERNTLRLSAYRLDLEDEIV---FDPSAETPAGGSFPGANVNADASRRYG 515

Query: 548 AEIGSRWYATSSLELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSS 607
                 W AT  L L      +  EF E     K L    K +    + YD  +  +  +
Sbjct: 516 VSADWDWQATQDLLLGLEYNYIDAEFTEGANEGKALSWVAKNTGRGYVSYDVYEHLQLFA 575

Query: 608 NAAYTGSYFSESGNSEK-FAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTTL-YLST 665
            A YTG  + E  N+ +   +D+Y +AN  + Y  +   A+L   NLLD +  +  Y ST
Sbjct: 576 EAVYTGERYMEGDNANQGDKLDAYTLANIAINYSRDAWLASLRVDNLLDKEYVSSGYFST 635